Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32990

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,801,838	-		RR42_RS32985	0.34	+1.1
2,801,924	-		RR42_RS32985	0.43	+0.0
2,801,924	-		RR42_RS32985	0.43	-0.5
2,801,924	-		RR42_RS32985	0.43	+0.6
2,801,930	+		RR42_RS32985	0.43	+0.7
2,801,930	+		RR42_RS32985	0.43	-0.1
2,801,930	+		RR42_RS32985	0.43	-0.9
2,801,930	+		RR42_RS32985	0.43	-0.3
2,801,930	+		RR42_RS32985	0.43	-1.1
2,801,930	+		RR42_RS32985	0.43	+0.0
2,801,931	-		RR42_RS32985	0.43	+1.0
2,801,931	-		RR42_RS32985	0.43	+1.8
2,801,931	-		RR42_RS32985	0.43	-0.9
2,801,931	-		RR42_RS32985	0.43	-0.5
2,802,016	+		RR42_RS32985	0.52	-0.3
2,802,017	-		RR42_RS32985	0.52	+0.8
2,802,212	+		RR42_RS32985	0.72	-0.5
2,802,212	+		RR42_RS32985	0.72	+0.7
2,802,212	+		RR42_RS32985	0.72	+2.3
2,802,213	-		RR42_RS32985	0.72	-0.6
2,802,213	-		RR42_RS32985	0.72	-0.7
2,802,213	-		RR42_RS32985	0.72	+1.0
2,802,213	-		RR42_RS32985	0.72	+0.7
2,802,213	-		RR42_RS32985	0.72	-2.6
2,802,215	-		RR42_RS32985	0.72	+2.5
2,802,215	-		RR42_RS32985	0.72	+1.0
2,802,496	+				-0.3
2,802,668	+				+0.6
2,802,668	+				+0.1
2,802,668	+				+0.1
2,802,669	-				+0.6
2,802,670	+				+0.8
2,802,707	-				-1.6
2,802,707	-				-0.7
2,802,707	-				+0.1
2,802,875	-		RR42_RS32990	0.23	+1.7
2,803,087	+		RR42_RS32990	0.43	-0.7
2,803,088	-		RR42_RS32990	0.44	+0.3
2,803,088	-		RR42_RS32990	0.44	+0.2
2,803,333	+		RR42_RS32990	0.68	+1.0
2,803,333	+		RR42_RS32990	0.68	-1.7
2,803,333	+		RR42_RS32990	0.68	+0.1
2,803,348	+		RR42_RS32990	0.69	-0.6
2,803,348	+		RR42_RS32990	0.69	+1.1
2,803,492	+		RR42_RS32990	0.83	+0.5
2,803,493	-		RR42_RS32990	0.83	+1.1
2,803,493	-		RR42_RS32990	0.83	+0.2
2,803,493	-		RR42_RS32990	0.83	-0.0
2,803,559	-		RR42_RS32990	0.90	+1.3
2,803,956	+		RR42_RS32995	0.14	-0.7
2,804,251	+		RR42_RS32995	0.72	-1.0
2,804,251	+		RR42_RS32995	0.72	-1.3
2,804,252	-		RR42_RS32995	0.72	+0.7
2,804,318	-		RR42_RS32995	0.85	+1.3
2,804,318	-		RR42_RS32995	0.85	-0.6
2,804,339	+		RR42_RS32995	0.89	+0.3
2,804,339	+		RR42_RS32995	0.89	+0.8
2,804,339	+		RR42_RS32995	0.89	-1.7
2,804,340	-		RR42_RS32995	0.89	-0.8
2,804,340	-		RR42_RS32995	0.89	-0.2
2,804,440	-				-1.2
2,804,536	-				-0.6