Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31125

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,361,482	+				-0.3
2,361,575	+				-0.5
2,361,707	+		RR42_RS31120	0.12	+0.1
2,361,707	+		RR42_RS31120	0.12	+0.8
2,361,707	+		RR42_RS31120	0.12	-0.5
2,361,708	-		RR42_RS31120	0.13	+0.9
2,361,708	-		RR42_RS31120	0.13	-1.1
2,361,848	+		RR42_RS31120	0.48	+0.8
2,361,848	+		RR42_RS31120	0.48	-0.9
2,361,848	+		RR42_RS31120	0.48	+0.2
2,361,848	+		RR42_RS31120	0.48	-0.1
2,361,849	-		RR42_RS31120	0.48	+0.5
2,361,849	-		RR42_RS31120	0.48	-0.6
2,361,849	-		RR42_RS31120	0.48	-0.3
2,361,849	-		RR42_RS31120	0.48	-0.2
2,361,849	-		RR42_RS31120	0.48	-0.1
2,361,849	-		RR42_RS31120	0.48	+0.3
2,361,849	-		RR42_RS31120	0.48	-1.1
2,361,849	-		RR42_RS31120	0.48	-1.0
2,361,849	-		RR42_RS31120	0.48	+0.4
2,362,028	+				+0.7
2,362,028	+				-1.7
2,362,029	-				-1.1
2,362,029	-				-0.5
2,362,029	-				+0.3
2,362,029	-				+0.5
2,362,180	-				+1.0
2,362,210	+				-0.3
2,362,210	+				+1.3
2,362,211	-				+0.5
2,362,211	-				-0.2
2,362,222	+				+0.2
2,362,284	+				+0.2
2,362,285	-				-1.4
2,362,285	-				-1.9
2,362,285	-				+1.1
2,362,332	+				-0.2
2,362,332	+				+1.3
2,362,333	-				-0.2
2,362,333	-				+0.1
2,362,351	+				+0.3
2,362,351	+				+0.0
2,362,351	+				+2.3
2,362,352	-				+1.7
2,362,603	+		RR42_RS31125	0.49	-0.6
2,362,603	+		RR42_RS31125	0.49	+0.8
2,362,604	-		RR42_RS31125	0.49	-1.5
2,362,613	-		RR42_RS31125	0.53	-0.7
2,362,613	-		RR42_RS31125	0.53	-1.1
2,362,775	+				+0.0
2,362,775	+				-0.4
2,362,775	+				-1.1
2,362,776	-				-1.6
2,362,776	-				+0.9
2,362,938	+		RR42_RS31130	0.14	+0.2
2,362,939	-		RR42_RS31130	0.14	+0.7
2,362,939	-		RR42_RS31130	0.14	+0.5
2,363,142	+		RR42_RS31130	0.27	-0.6
2,363,142	+		RR42_RS31130	0.27	-0.1
2,363,179	+		RR42_RS31130	0.29	-0.4
2,363,400	-		RR42_RS31130	0.43	-0.6
2,363,400	-		RR42_RS31130	0.43	+0.4
2,363,404	-		RR42_RS31130	0.44	+0.7
2,363,404	-		RR42_RS31130	0.44	+0.6
2,363,406	+		RR42_RS31130	0.44	-0.2
2,363,406	+		RR42_RS31130	0.44	-1.2
2,363,698	-		RR42_RS31130	0.62	+0.9
2,363,698	-		RR42_RS31130	0.62	-2.0
2,363,698	-		RR42_RS31130	0.62	-0.6
2,363,698	-		RR42_RS31130	0.62	-0.5
2,363,698	-		RR42_RS31130	0.62	+0.9