Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30090

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,121,620	+				-0.7
2,121,651	+				+0.7
2,121,775	+		RR42_RS30085	0.14	+0.7
2,121,776	-		RR42_RS30085	0.14	-0.3
2,121,940	+		RR42_RS30085	0.59	-0.4
2,121,941	-		RR42_RS30085	0.59	-0.8
2,121,941	-		RR42_RS30085	0.59	-0.3
2,122,083	+				-1.4
2,122,084	-				-0.1
2,122,084	-				+0.1
2,122,084	-				+0.5
2,122,109	-				+0.5
2,122,119	+				-1.7
2,122,119	+				-0.6
2,122,120	-				+0.4
2,122,123	+				-0.3
2,122,162	+				-1.1
2,122,239	-				-1.2
2,122,239	-				-2.1
2,122,374	-				+0.9
2,122,527	-				+2.3
2,122,535	-				-0.5
2,122,861	+		RR42_RS30090	0.23	+0.1
2,123,062	-		RR42_RS30090	0.39	-0.4
2,123,233	-		RR42_RS30090	0.53	+0.5
2,123,384	+		RR42_RS30090	0.64	-0.0
2,123,384	+		RR42_RS30090	0.64	-1.3
2,123,384	+		RR42_RS30090	0.64	-0.8
2,123,384	+		RR42_RS30090	0.64	+1.3
2,123,385	-		RR42_RS30090	0.64	-1.5
2,123,385	-		RR42_RS30090	0.64	-1.5
2,123,385	-		RR42_RS30090	0.64	+0.5
2,123,385	-		RR42_RS30090	0.64	+1.0
2,123,489	+		RR42_RS30090	0.73	+1.3
2,123,489	+		RR42_RS30090	0.73	-0.9
2,123,499	+		RR42_RS30090	0.73	+0.2
2,123,500	-		RR42_RS30090	0.74	-0.2
2,123,500	-		RR42_RS30090	0.74	-1.8
2,123,500	-		RR42_RS30090	0.74	-0.7
2,123,525	-		RR42_RS30090	0.75	-2.0
2,123,531	+		RR42_RS30090	0.76	-0.7
2,123,900	+				-1.4
2,123,900	+				-1.5
2,123,901	-				-0.2
2,124,044	+				-0.1
2,124,190	+		RR42_RS30095	0.17	-0.0
2,124,191	-		RR42_RS30095	0.18	+0.7
2,124,192	+		RR42_RS30095	0.18	+0.8
2,124,192	+		RR42_RS30095	0.18	-0.3
2,124,193	-		RR42_RS30095	0.18	+1.2
2,124,193	-		RR42_RS30095	0.18	-0.3
2,124,193	-		RR42_RS30095	0.18	+0.0
2,124,193	-		RR42_RS30095	0.18	+0.1
2,124,559	-		RR42_RS30095	0.55	-0.8
2,124,606	+		RR42_RS30095	0.60	+2.3
2,124,606	+		RR42_RS30095	0.60	+1.4
2,124,735	+		RR42_RS30095	0.74	-0.7