Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28910

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,842,272	+		RR42_RS28905	0.68	-1.0
1,842,272	+		RR42_RS28905	0.68	-0.6
1,842,272	+		RR42_RS28905	0.68	+1.2
1,842,272	+		RR42_RS28905	0.68	-1.8
1,842,272	+		RR42_RS28905	0.68	-1.1
1,842,273	-		RR42_RS28905	0.68	-1.4
1,842,314	-		RR42_RS28905	0.70	+1.4
1,842,424	+		RR42_RS28905	0.75	-1.6
1,842,424	+		RR42_RS28905	0.75	+0.9
1,842,424	+		RR42_RS28905	0.75	-0.0
1,842,425	-		RR42_RS28905	0.75	-1.8
1,842,453	-		RR42_RS28905	0.77	+0.6
1,842,515	+		RR42_RS28905	0.80	-1.6
1,842,516	-		RR42_RS28905	0.80	-2.2
1,842,526	+		RR42_RS28905	0.80	+0.4
1,842,527	-		RR42_RS28905	0.80	-1.1
1,842,802	+				+0.4
1,842,802	+				+2.2
1,842,803	-				+0.5
1,842,803	-				+1.2
1,842,803	-				-0.9
1,842,803	-				+1.5
1,842,862	+				-0.3
1,842,881	-				-1.4
1,842,925	+				-0.5
1,842,925	+				+1.2
1,842,925	+				-1.0
1,842,925	+				+2.2
1,842,925	+				-0.3
1,842,926	-				-0.1
1,842,959	+				-0.5
1,843,050	+				-0.9
1,843,050	+				+0.4
1,843,050	+				+0.5
1,843,050	+				-0.9
1,843,051	-				+0.4
1,843,139	-				+0.0
1,843,141	-				-1.8
1,843,186	-		RR42_RS28910	0.15	-0.5
1,843,186	-		RR42_RS28910	0.15	+0.8
1,843,312	+		RR42_RS28910	0.29	-1.9
1,843,312	+		RR42_RS28910	0.29	+0.5
1,843,313	-		RR42_RS28910	0.30	+0.8
1,843,313	-		RR42_RS28910	0.30	-1.8
1,844,004	+				-0.8
1,844,004	+				+1.1
1,844,005	-				-0.1
1,844,102	+				+1.3
1,844,186	-		RR42_RS28915	0.12	+0.6
1,844,374	+		RR42_RS28915	0.46	+0.9
1,844,524	+		RR42_RS28915	0.73	+0.1
1,844,524	+		RR42_RS28915	0.73	+0.4
1,844,524	+		RR42_RS28915	0.73	-2.9
1,844,524	+		RR42_RS28915	0.73	-0.3
1,844,524	+		RR42_RS28915	0.73	+0.3
1,844,524	+		RR42_RS28915	0.73	-1.9
1,844,524	+		RR42_RS28915	0.73	-0.1
1,844,525	-		RR42_RS28915	0.74	-0.2
1,844,549	-		RR42_RS28915	0.78	+0.8
1,844,561	-		RR42_RS28915	0.80	+0.1
1,844,789	-				-0.2
1,844,895	+		RR42_RS28920	0.25	-1.2
1,844,895	+		RR42_RS28920	0.25	+0.2
1,844,895	+		RR42_RS28920	0.25	+1.2
1,844,895	+		RR42_RS28920	0.25	-0.3
1,844,895	+		RR42_RS28920	0.25	-2.3