Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28410

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,733,634	+		RR42_RS28405	0.16	+0.1
1,733,635	-		RR42_RS28405	0.16	+0.6
1,733,687	+		RR42_RS28405	0.21	-0.2
1,733,819	+		RR42_RS28405	0.34	+0.6
1,733,820	-		RR42_RS28405	0.34	-0.1
1,734,401	+				-0.3
1,734,402	-				-0.7
1,734,494	-				+0.8
1,734,526	+				-0.3
1,734,527	-				-1.7
1,734,527	-				+0.0
1,734,581	-		RR42_RS28410	0.12	-0.6
1,734,890	+		RR42_RS28410	0.58	-1.7
1,734,911	+		RR42_RS28410	0.61	-2.0
1,734,990	+		RR42_RS28410	0.73	-0.7
1,735,143	+				-0.6
1,735,164	+				+0.7
1,735,165	-				+0.1
1,735,320	-		RR42_RS28415	0.22	+0.0
1,735,331	+		RR42_RS28415	0.24	-2.2
1,735,332	-		RR42_RS28415	0.24	+0.6
1,735,370	+		RR42_RS28415	0.30	-0.1
1,735,371	-		RR42_RS28415	0.30	-0.1
1,735,411	+		RR42_RS28415	0.36	+0.2
1,735,412	-		RR42_RS28415	0.36	+0.5
1,735,533	+		RR42_RS28415	0.54	-0.1
1,735,533	+		RR42_RS28415	0.54	+0.2
1,735,608	+		RR42_RS28415	0.66	-1.7
1,735,609	-		RR42_RS28415	0.66	-1.1
1,736,048	+		RR42_RS28420	0.32	-0.0
1,736,048	+		RR42_RS28420	0.32	-2.3
1,736,049	-		RR42_RS28420	0.32	+0.3
1,736,049	-		RR42_RS28420	0.32	-1.0
1,736,049	-		RR42_RS28420	0.32	-0.7