Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27955

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,633,301	+		RR42_RS27945	0.78	+0.2
1,633,302	-		RR42_RS27945	0.78	-1.2
1,633,302	-		RR42_RS27945	0.78	-2.0
1,633,302	-		RR42_RS27945	0.78	-0.5
1,633,505	+				+0.5
1,633,505	+				-0.7
1,633,506	-				+0.3
1,633,542	-				-1.1
1,633,542	-				+0.3
1,633,899	+		RR42_RS27950	0.50	-0.9
1,633,900	-		RR42_RS27950	0.50	-0.4
1,633,900	-		RR42_RS27950	0.50	-0.2
1,634,082	-				+0.3
1,634,165	+				+0.5
1,634,166	-				+0.3
1,634,376	+				-0.5
1,634,377	-				-0.2
1,634,474	+		RR42_RS27955	0.14	-0.5
1,634,474	+		RR42_RS27955	0.14	+0.7
1,634,474	+		RR42_RS27955	0.14	-1.2
1,634,475	-		RR42_RS27955	0.14	+0.7
1,634,531	+		RR42_RS27955	0.18	+0.0
1,634,532	-		RR42_RS27955	0.18	-1.2
1,634,532	-		RR42_RS27955	0.18	-0.6
1,634,595	-		RR42_RS27955	0.23	-0.0
1,634,595	-		RR42_RS27955	0.23	+2.2
1,634,942	+		RR42_RS27955	0.47	-1.4
1,634,942	+		RR42_RS27955	0.47	-1.6
1,634,942	+		RR42_RS27955	0.47	-0.7
1,634,942	+		RR42_RS27955	0.47	+0.8
1,634,943	-		RR42_RS27955	0.48	+0.9
1,634,943	-		RR42_RS27955	0.48	-0.5
1,635,056	+		RR42_RS27955	0.56	-0.3
1,635,057	-		RR42_RS27955	0.56	+0.0
1,635,151	-		RR42_RS27955	0.62	-0.3
1,635,269	+		RR42_RS27955	0.71	-1.1
1,635,269	+		RR42_RS27955	0.71	+0.2
1,635,464	+		RR42_RS27955	0.85	-0.5
1,635,613	-				-1.4
1,635,614	+				-0.8
1,635,614	+				-0.7
1,635,614	+				-1.3
1,635,615	-				-1.1
1,635,747	+				-0.1
1,635,747	+				-0.1
1,635,748	-				-0.0
1,635,805	+				+0.7
1,636,151	+		RR42_RS27960	0.42	-0.4
1,636,152	-		RR42_RS27960	0.42	-0.7
1,636,254	-		RR42_RS27960	0.53	-1.7
1,636,354	+		RR42_RS27960	0.63	-2.6
1,636,354	+		RR42_RS27960	0.63	+0.4
1,636,354	+		RR42_RS27960	0.63	+1.3
1,636,369	+		RR42_RS27960	0.64	+0.4
1,636,369	+		RR42_RS27960	0.64	+0.5
1,636,369	+		RR42_RS27960	0.64	-0.6
1,636,505	+		RR42_RS27960	0.78	+1.5
1,636,506	-		RR42_RS27960	0.78	-0.1
1,636,506	-		RR42_RS27960	0.78	-2.4
1,636,506	-		RR42_RS27960	0.78	-0.2
1,636,506	-		RR42_RS27960	0.78	-0.2
1,636,506	-		RR42_RS27960	0.78	+1.0
1,636,543	+		RR42_RS27960	0.82	-1.6