Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27650

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,565,395	+		RR42_RS27640	0.51	+0.2
1,565,455	+		RR42_RS27640	0.59	+1.1
1,565,499	+		RR42_RS27640	0.64	+0.5
1,565,499	+		RR42_RS27640	0.64	-0.2
1,565,618	+		RR42_RS27640	0.80	+0.3
1,565,618	+		RR42_RS27640	0.80	+0.5
1,565,619	-		RR42_RS27640	0.80	+0.5
1,565,619	-		RR42_RS27640	0.80	+0.2
1,565,619	-		RR42_RS27640	0.80	-0.3
1,565,619	-		RR42_RS27640	0.80	-0.6
1,565,619	-		RR42_RS27640	0.80	-0.0
1,565,775	-				-0.1
1,565,827	+				+1.0
1,565,876	-				+1.0
1,565,876	-				-0.9
1,566,053	-		RR42_RS27645	0.73	+1.1
1,566,067	+		RR42_RS27645	0.79	+0.3
1,566,068	-		RR42_RS27645	0.79	+0.3
1,566,260	+				-0.3
1,566,261	-				+0.8
1,566,425	+		RR42_RS27650	0.23	-0.4
1,566,426	-		RR42_RS27650	0.23	-0.6
1,566,551	+		RR42_RS27650	0.36	-0.3
1,566,551	+		RR42_RS27650	0.36	+1.8
1,566,566	+		RR42_RS27650	0.38	-2.3
1,566,567	-		RR42_RS27650	0.38	-0.2
1,566,596	+		RR42_RS27650	0.41	+1.6
1,566,596	+		RR42_RS27650	0.41	-0.9
1,566,597	-		RR42_RS27650	0.41	-0.1
1,566,701	+		RR42_RS27650	0.51	-0.6
1,566,833	+		RR42_RS27650	0.65	+3.0
1,566,834	-		RR42_RS27650	0.65	-1.1
1,566,834	-		RR42_RS27650	0.65	+0.8
1,566,834	-		RR42_RS27650	0.65	-0.2
1,566,838	-		RR42_RS27650	0.65	+0.5
1,567,046	+		RR42_RS27650	0.86	-0.2
1,567,047	-		RR42_RS27650	0.86	+0.3
1,567,074	-		RR42_RS27650	0.89	+1.5
1,567,074	-		RR42_RS27650	0.89	+0.4
1,567,076	+		RR42_RS27650	0.89	+0.8
1,567,076	+		RR42_RS27650	0.89	-0.5
1,567,076	+		RR42_RS27650	0.89	-0.6
1,567,077	-		RR42_RS27650	0.90	+0.3
1,567,077	-		RR42_RS27650	0.90	-1.1
1,567,106	+				+0.6
1,567,106	+				+2.1
1,567,287	-				-1.9
1,567,304	-				-2.3
1,567,304	-				+0.3
1,567,304	-				+0.3
1,567,312	+				-1.2
1,567,312	+				-1.2
1,567,312	+				-0.1
1,567,353	+				-0.1
1,567,354	-				-0.2
1,567,359	-				+1.3
1,567,478	+				-0.3
1,567,652	+		RR42_RS27655	0.21	+0.9
1,568,072	+		RR42_RS27655	0.73	-0.9
1,568,073	-		RR42_RS27655	0.73	+1.0
1,568,073	-		RR42_RS27655	0.73	-0.6
1,568,142	-		RR42_RS27655	0.81	+0.1