Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27255

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,466,614	-		RR42_RS27250	0.75	-1.2
1,466,703	+		RR42_RS27250	0.82	+0.8
1,466,703	+		RR42_RS27250	0.82	-0.3
1,466,704	-		RR42_RS27250	0.82	+0.8
1,466,704	-		RR42_RS27250	0.82	-0.5
1,466,821	-				-1.1
1,466,829	+				+0.4
1,466,829	+				-0.4
1,466,830	-				-0.8
1,466,830	-				-1.1
1,466,830	-				-1.2
1,466,830	-				+0.0
1,466,830	-				+0.0
1,466,878	+				+0.1
1,467,034	+				+0.5
1,467,034	+				-1.1
1,467,034	+				-0.1
1,467,034	+				-2.0
1,467,034	+				-0.6
1,467,035	-				-1.5
1,467,035	-				-0.7
1,467,035	-				-0.6
1,467,035	-				-0.5
1,467,035	-				+0.4
1,467,035	-				-0.0
1,467,035	-				-0.2
1,467,035	-				-0.0
1,467,035	-				+0.2
1,467,036	+				-1.5
1,467,036	+				-0.1
1,467,037	-				-0.1
1,467,037	-				+0.1
1,467,037	-				-0.3
1,467,116	-				+0.9
1,467,241	+				-0.1
1,467,241	+				-1.3
1,467,241	+				+0.3
1,467,242	-				-0.7
1,467,242	-				+1.1
1,467,252	+				-1.9
1,467,310	+				-0.9
1,467,311	-				-0.7
1,467,316	+				-0.9
1,467,317	-				+0.5
1,467,317	-				-0.7
1,467,431	+				-0.7
1,467,573	+				+0.7
1,467,578	-				+0.2
1,467,779	-		RR42_RS27255	0.25	+0.3
1,467,779	-		RR42_RS27255	0.25	-2.5
1,467,779	-		RR42_RS27255	0.25	+0.7
1,467,908	+		RR42_RS27255	0.42	+0.1
1,467,967	-		RR42_RS27255	0.50	-1.5
1,468,060	+		RR42_RS27255	0.63	+0.5
1,468,060	+		RR42_RS27255	0.63	-0.0
1,468,060	+		RR42_RS27255	0.63	-0.3
1,468,061	-		RR42_RS27255	0.63	+1.7
1,468,063	+		RR42_RS27255	0.63	+0.2
1,468,064	-		RR42_RS27255	0.63	+0.2
1,468,071	+		RR42_RS27255	0.64	+0.3
1,468,096	+		RR42_RS27255	0.67	-0.9
1,468,097	-		RR42_RS27255	0.68	+0.4
1,468,097	-		RR42_RS27255	0.68	-1.9
1,468,100	+		RR42_RS27255	0.68	+0.7
1,468,100	+		RR42_RS27255	0.68	+0.3
1,468,100	+		RR42_RS27255	0.68	+1.3
1,468,100	+		RR42_RS27255	0.68	-1.5
1,468,100	+		RR42_RS27255	0.68	+0.4
1,468,100	+		RR42_RS27255	0.68	+0.3
1,468,131	+		RR42_RS27255	0.72	+0.8
1,468,131	+		RR42_RS27255	0.72	-0.3
1,468,207	+		RR42_RS27255	0.82	+0.4
1,468,208	-		RR42_RS27255	0.82	-0.6
1,468,274	+				-0.1
1,468,278	+				-1.6
1,468,278	+				-0.2
1,468,279	-				-0.6
1,468,279	-				+0.4
1,468,337	-				+0.7
1,468,337	-				-0.1
1,468,491	-				-0.3
1,468,506	-				+0.2
1,468,513	-				+1.2
1,468,669	-				-0.2
1,468,669	-				-2.1
1,468,675	+				-0.2
1,468,868	+				-0.8
1,468,868	+				+1.3
1,468,869	-				-0.1
1,468,869	-				+0.9
1,468,947	-		RR42_RS27260	0.16	+0.9
1,468,947	-		RR42_RS27260	0.16	-0.2
1,469,006	-		RR42_RS27260	0.22	-0.1
1,469,018	+		RR42_RS27260	0.23	+0.8
1,469,019	-		RR42_RS27260	0.23	+0.9
1,469,019	-		RR42_RS27260	0.23	+0.9
1,469,204	+		RR42_RS27260	0.39	-0.2
1,469,327	-		RR42_RS27260	0.50	+0.9