Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26600

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,321,977	+		RR42_RS26595	0.80	-0.1
1,321,977	+		RR42_RS26595	0.80	+0.5
1,321,978	-		RR42_RS26595	0.80	+0.1
1,321,978	-		RR42_RS26595	0.80	-1.7
1,321,978	-		RR42_RS26595	0.80	+0.9
1,321,978	-		RR42_RS26595	0.80	+0.2
1,321,978	-		RR42_RS26595	0.80	-2.9
1,321,978	-		RR42_RS26595	0.80	-0.4
1,321,987	+		RR42_RS26595	0.81	+0.9
1,322,079	+		RR42_RS26595	0.87	-0.7
1,322,080	-		RR42_RS26595	0.87	+0.4
1,322,138	+				-0.7
1,322,234	+				+0.0
1,322,420	-				-0.4
1,322,423	-				+0.0
1,322,429	+				+1.0
1,322,465	+				+0.1
1,322,465	+				-1.1
1,322,466	-				-0.8
1,322,466	-				+0.3
1,322,753	+				-1.0
1,322,753	+				+0.5
1,322,832	-				+0.7
1,322,832	-				+0.7
1,322,832	-				-0.5
1,322,832	-				-1.8
1,323,087	+		RR42_RS26600	0.35	-0.1
1,323,087	+		RR42_RS26600	0.35	-0.9
1,323,140	-		RR42_RS26600	0.47	+0.0
1,323,193	+		RR42_RS26600	0.58	-2.5
1,323,193	+		RR42_RS26600	0.58	+0.0
1,323,209	-		RR42_RS26600	0.62	-0.1
1,323,209	-		RR42_RS26600	0.62	+1.7
1,323,229	-		RR42_RS26600	0.66	-1.3
1,323,229	-		RR42_RS26600	0.66	-0.3
1,323,250	+		RR42_RS26600	0.71	-0.4
1,323,250	+		RR42_RS26600	0.71	+1.3
1,323,250	+		RR42_RS26600	0.71	+0.3
1,323,250	+		RR42_RS26600	0.71	-0.8
1,323,251	-		RR42_RS26600	0.71	-0.7
1,323,283	+		RR42_RS26600	0.78	+0.5
1,323,283	+		RR42_RS26600	0.78	-0.2
1,323,283	+		RR42_RS26600	0.78	-0.8
1,323,284	-		RR42_RS26600	0.79	-0.9
1,323,284	-		RR42_RS26600	0.79	+2.3
1,323,284	-		RR42_RS26600	0.79	-1.3
1,323,284	-		RR42_RS26600	0.79	-1.3
1,323,396	+				+0.1
1,323,396	+				-0.1
1,323,396	+				-0.6
1,323,396	+				+0.6
1,323,396	+				-0.4
1,323,396	+				+0.4
1,323,404	-				+0.4
1,323,404	-				+1.3
1,323,418	-				-0.4
1,323,439	-				-1.0
1,323,446	-				+0.6
1,323,453	-				+1.8
1,323,453	-				-1.7
1,323,453	-				-0.3
1,323,453	-				+0.2
1,323,453	-				-0.2
1,323,453	-				-0.7
1,323,453	-				+0.2
1,323,471	+				-1.0
1,323,487	+				-2.9
1,323,487	+				-0.5
1,323,501	+				+0.8
1,323,508	+				-0.1
1,323,508	+				+2.0
1,323,508	+				-1.0
1,323,515	+				-0.1
1,323,661	+				+1.5
1,323,741	+				-0.7
1,323,741	+				-0.0
1,323,742	-				+0.5
1,323,742	-				-0.0
1,323,742	-				+0.0
1,323,838	+				+0.7
1,323,984	-				+0.6
1,323,984	-				+1.0
1,324,005	+				+0.7
1,324,129	+		RR42_RS26605	0.47	+0.4
1,324,129	+		RR42_RS26605	0.47	-0.7
1,324,216	-		RR42_RS26605	0.75	+0.5
1,324,216	-		RR42_RS26605	0.75	-0.3
1,324,248	-		RR42_RS26605	0.85	+0.2
1,324,248	-		RR42_RS26605	0.85	-0.7
1,324,267	+				+0.9
1,324,267	+				-0.4
1,324,267	+				-0.9
1,324,267	+				-0.2
1,324,268	-				+1.5
1,324,268	-				+0.3
1,324,268	-				-0.1
1,324,268	-				+0.7
1,324,284	+				-0.7
1,324,325	-				+0.1
1,324,325	-				+0.3
1,324,325	-				-0.3
1,324,328	+				+1.2
1,324,342	+				+1.0
1,324,343	-				-0.5
1,324,371	+				+0.3