Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26500

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,300,920	-		RR42_RS26495	0.62	+2.3
1,301,053	+		RR42_RS26495	0.68	-0.4
1,301,053	+		RR42_RS26495	0.68	-0.3
1,301,054	-		RR42_RS26495	0.68	-1.5
1,301,142	+		RR42_RS26495	0.72	+0.1
1,301,142	+		RR42_RS26495	0.72	+3.3
1,301,240	-		RR42_RS26495	0.76	+0.3
1,301,241	+		RR42_RS26495	0.76	-0.8
1,301,242	-		RR42_RS26495	0.76	-1.3
1,301,303	-		RR42_RS26495	0.78	-1.0
1,301,303	-		RR42_RS26495	0.78	-0.5
1,301,336	-		RR42_RS26495	0.80	-0.9
1,301,336	-		RR42_RS26495	0.80	-0.6
1,301,398	+		RR42_RS26495	0.82	+0.1
1,301,398	+		RR42_RS26495	0.82	+0.5
1,301,398	+		RR42_RS26495	0.82	-1.5
1,301,458	+		RR42_RS26495	0.85	+0.1
1,301,551	+		RR42_RS26495	0.89	+0.0
1,301,551	+		RR42_RS26495	0.89	+0.5
1,301,551	+		RR42_RS26495	0.89	+0.3
1,301,552	-		RR42_RS26495	0.89	+0.8
1,301,852	-				-0.1
1,301,983	+		RR42_RS26500	0.18	-1.0
1,301,984	-		RR42_RS26500	0.19	-0.6
1,302,000	-		RR42_RS26500	0.21	+1.6
1,302,009	-		RR42_RS26500	0.22	-2.7
1,302,298	+		RR42_RS26500	0.57	+0.5
1,302,298	+		RR42_RS26500	0.57	-0.0
1,302,298	+		RR42_RS26500	0.57	+0.1
1,302,298	+		RR42_RS26500	0.57	-0.1
1,302,298	+		RR42_RS26500	0.57	-0.9
1,302,298	+		RR42_RS26500	0.57	+4.8
1,302,299	-		RR42_RS26500	0.57	-0.3
1,302,628	-				-0.3
1,302,647	+				-0.4
1,302,647	+				+0.5
1,302,647	+				-1.2
1,302,898	-		RR42_RS26505	0.20	+0.3
1,302,967	-		RR42_RS26505	0.26	-0.1
1,303,080	+		RR42_RS26505	0.35	-1.3
1,303,081	-		RR42_RS26505	0.35	+1.3
1,303,081	-		RR42_RS26505	0.35	-0.7
1,303,081	-		RR42_RS26505	0.35	+0.6
1,303,081	-		RR42_RS26505	0.35	-1.0
1,303,554	-		RR42_RS26505	0.76	+1.3
1,303,560	+		RR42_RS26505	0.76	+0.6
1,303,560	+		RR42_RS26505	0.76	+0.3
1,303,561	-		RR42_RS26505	0.76	-1.3
1,303,614	+		RR42_RS26505	0.81	-1.1
1,303,615	-		RR42_RS26505	0.81	-0.5
1,303,615	-		RR42_RS26505	0.81	+0.0