Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26235

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,242,456	+		RR42_RS26230	0.64	-0.0
1,242,457	-		RR42_RS26230	0.64	+0.4
1,242,539	+		RR42_RS26230	0.70	+0.5
1,242,539	+		RR42_RS26230	0.70	-0.5
1,242,540	-		RR42_RS26230	0.70	+0.2
1,242,577	+		RR42_RS26230	0.73	+0.3
1,242,591	+		RR42_RS26230	0.74	-0.3
1,242,592	-		RR42_RS26230	0.74	-1.7
1,242,720	+		RR42_RS26230	0.84	-0.7
1,242,834	+				-1.6
1,242,834	+				-0.2
1,242,954	-				-1.0
1,242,998	+				-0.6
1,242,998	+				+0.2
1,242,998	+				-1.7
1,242,999	-				+0.5
1,242,999	-				-0.6
1,243,069	+				-1.5
1,243,070	-				+0.5
1,243,070	-				-0.2
1,243,072	+				+0.2
1,243,072	+				-0.3
1,243,072	+				+0.5
1,243,073	-				+1.2
1,243,073	-				+0.9
1,243,073	-				-1.0
1,243,285	+				-0.2
1,243,286	-				+0.2
1,243,286	-				-0.2
1,243,317	-				-0.2
1,243,487	+		RR42_RS26235	0.23	-1.3
1,243,516	+		RR42_RS26235	0.27	+0.7
1,243,516	+		RR42_RS26235	0.27	-0.8
1,243,516	+		RR42_RS26235	0.27	-1.0
1,243,516	+		RR42_RS26235	0.27	-0.2
1,243,517	-		RR42_RS26235	0.27	-0.3
1,243,593	+		RR42_RS26235	0.37	-0.5
1,243,846	+		RR42_RS26235	0.71	+0.1
1,243,847	-		RR42_RS26235	0.71	+0.3
1,243,872	+		RR42_RS26235	0.74	-1.5
1,243,874	+		RR42_RS26235	0.75	-0.4
1,244,027	+				-0.1
1,244,056	+				+1.5
1,244,056	+				-0.2
1,244,056	+				-0.9
1,244,056	+				-0.9
1,244,057	-				+0.2
1,244,106	-				+0.2
1,244,106	-				+0.5
1,244,285	+				+0.3
1,244,413	-				-0.5
1,244,446	+				+1.0
1,244,446	+				-0.3
1,244,637	+				-0.6
1,244,638	-				-1.9
1,244,689	-				+3.3
1,244,689	-				-0.1
1,244,724	-		RR42_RS26240	0.13	+0.1
1,244,817	+		RR42_RS26240	0.20	-0.1
1,244,817	+		RR42_RS26240	0.20	-2.3
1,244,817	+		RR42_RS26240	0.20	+0.7
1,244,817	+		RR42_RS26240	0.20	-1.8
1,244,817	+		RR42_RS26240	0.20	-0.7
1,244,817	+		RR42_RS26240	0.20	+0.5
1,244,817	+		RR42_RS26240	0.20	-0.4
1,244,817	+		RR42_RS26240	0.20	-0.7
1,244,818	-		RR42_RS26240	0.20	-0.2
1,244,818	-		RR42_RS26240	0.20	+0.5
1,244,818	-		RR42_RS26240	0.20	+0.1
1,244,818	-		RR42_RS26240	0.20	+0.4
1,244,818	-		RR42_RS26240	0.20	+0.6
1,244,818	-		RR42_RS26240	0.20	-1.2
1,244,818	-		RR42_RS26240	0.20	+1.6
1,245,024	+		RR42_RS26240	0.36	+0.6
1,245,024	+		RR42_RS26240	0.36	-0.7
1,245,025	-		RR42_RS26240	0.36	-2.4
1,245,025	-		RR42_RS26240	0.36	+0.1