Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25240

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,002,513	+				-1.2
1,002,514	-				+0.6
1,002,514	-				+0.9
1,002,517	+				+0.2
1,002,517	+				+0.8
1,002,517	+				-0.3
1,002,552	-				-0.3
1,002,552	-				-0.8
1,002,653	+				+1.0
1,002,654	-				+0.3
1,002,791	+		RR42_RS25235	0.10	-0.5
1,002,791	+		RR42_RS25235	0.10	+1.8
1,002,791	+		RR42_RS25235	0.10	+1.5
1,002,791	+		RR42_RS25235	0.10	-1.5
1,002,792	-		RR42_RS25235	0.10	+0.6
1,002,792	-		RR42_RS25235	0.10	-0.2
1,002,792	-		RR42_RS25235	0.10	+0.0
1,003,006	+		RR42_RS25235	0.46	+0.8
1,003,039	-		RR42_RS25235	0.51	+0.4
1,003,099	+		RR42_RS25235	0.61	-0.4
1,003,148	-		RR42_RS25235	0.69	-0.4
1,003,190	+		RR42_RS25235	0.76	-1.0
1,003,225	+		RR42_RS25235	0.82	-0.2
1,003,226	-		RR42_RS25235	0.82	+0.5
1,003,367	+				+0.1
1,003,368	-				+0.4
1,003,368	-				-0.9
1,003,368	-				+1.3
1,003,368	-				-0.1
1,004,022	+		RR42_RS25240	0.64	-0.2
1,004,022	+		RR42_RS25240	0.64	-1.3
1,004,023	-		RR42_RS25240	0.64	-0.1
1,004,023	-		RR42_RS25240	0.64	-0.3
1,004,070	-		RR42_RS25240	0.68	-0.1
1,004,070	-		RR42_RS25240	0.68	-0.1
1,004,135	+		RR42_RS25240	0.75	+2.8
1,004,135	+		RR42_RS25240	0.75	-0.1
1,004,136	-		RR42_RS25240	0.75	+0.2
1,004,402	-				+1.1
1,004,463	-				-0.3
1,004,463	-				+0.7
1,004,496	-				+0.4
1,004,635	+		RR42_RS25245	0.12	-2.0
1,004,635	+		RR42_RS25245	0.12	+0.4
1,004,635	+		RR42_RS25245	0.12	+0.2
1,004,636	-		RR42_RS25245	0.13	+0.7
1,004,636	-		RR42_RS25245	0.13	+1.3
1,004,758	-		RR42_RS25245	0.31	-0.9
1,004,999	+		RR42_RS25245	0.68	-0.3
1,004,999	+		RR42_RS25245	0.68	-0.7
1,005,000	-		RR42_RS25245	0.68	-0.0
1,005,043	+		RR42_RS25245	0.75	+1.1
1,005,043	+		RR42_RS25245	0.75	-0.5
1,005,184	+				-0.8
1,005,254	+				-0.7
1,005,255	-				-0.7
1,005,255	-				-0.4
1,005,255	-				+0.1
1,005,291	+				-0.3
1,005,291	+				+0.1