Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20425

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
4,423,694	-		RR42_RS20420	0.45	-1.1
4,423,711	+		RR42_RS20420	0.46	+0.3
4,423,712	-		RR42_RS20420	0.46	+1.2
4,423,783	-		RR42_RS20420	0.50	+0.8
4,423,803	+		RR42_RS20420	0.51	-0.2
4,423,803	+		RR42_RS20420	0.51	+0.3
4,423,803	+		RR42_RS20420	0.51	+1.0
4,423,803	+		RR42_RS20420	0.51	+0.5
4,423,803	+		RR42_RS20420	0.51	-0.0
4,423,803	+		RR42_RS20420	0.51	+2.6
4,423,804	-		RR42_RS20420	0.51	+0.9
4,423,804	-		RR42_RS20420	0.51	+1.1
4,423,804	-		RR42_RS20420	0.51	-1.8
4,423,804	-		RR42_RS20420	0.51	+0.6
4,423,804	-		RR42_RS20420	0.51	+0.1
4,423,805	+		RR42_RS20420	0.51	+1.8
4,423,806	-		RR42_RS20420	0.51	+1.0
4,423,806	-		RR42_RS20420	0.51	+1.2
4,423,806	-		RR42_RS20420	0.51	+2.8
4,423,965	+		RR42_RS20420	0.60	+1.9
4,423,965	+		RR42_RS20420	0.60	+1.4
4,423,965	+		RR42_RS20420	0.60	+0.6
4,423,965	+		RR42_RS20420	0.60	+0.5
4,423,966	-		RR42_RS20420	0.60	+0.7
4,423,971	+		RR42_RS20420	0.61	+0.8
4,423,971	+		RR42_RS20420	0.61	-0.1
4,423,971	+		RR42_RS20420	0.61	+1.0
4,423,971	+		RR42_RS20420	0.61	+1.8
4,423,972	-		RR42_RS20420	0.61	+0.6
4,423,972	-		RR42_RS20420	0.61	+0.8
4,424,013	+		RR42_RS20420	0.63	+0.4
4,424,014	-		RR42_RS20420	0.63	+0.3
4,424,014	-		RR42_RS20420	0.63	-0.5
4,424,073	+		RR42_RS20420	0.66	-0.6
4,424,074	-		RR42_RS20420	0.66	-0.5
4,424,075	+		RR42_RS20420	0.67	+1.1
4,424,075	+		RR42_RS20420	0.67	+2.0
4,424,076	-		RR42_RS20420	0.67	+0.2
4,424,076	-		RR42_RS20420	0.67	+0.7
4,424,220	+		RR42_RS20420	0.75	+1.0
4,424,220	+		RR42_RS20420	0.75	+0.6
4,424,252	-		RR42_RS20420	0.77	-0.2
4,424,385	+		RR42_RS20420	0.84	+0.7
4,424,385	+		RR42_RS20420	0.84	+1.1
4,424,385	+		RR42_RS20420	0.84	-0.8
4,424,385	+		RR42_RS20420	0.84	+0.2
4,424,385	+		RR42_RS20420	0.84	+0.9
4,424,386	-		RR42_RS20420	0.84	+0.3
4,424,386	-		RR42_RS20420	0.84	+0.8
4,424,386	-		RR42_RS20420	0.84	-0.2
4,424,387	+		RR42_RS20420	0.85	+1.4
4,424,538	+				+0.3
4,424,538	+				+0.9
4,424,538	+				+1.7
4,424,538	+				+0.1
4,424,539	-				+0.7
4,424,539	-				+0.0
4,424,539	-				-0.5
4,424,539	-				+2.2
4,424,539	-				-1.8
4,424,544	+				+1.1
4,424,544	+				+0.5
4,424,544	+				+0.3
4,424,544	+				+2.6
4,424,545	-				+0.6
4,424,545	-				+1.2
4,424,545	-				+1.1
4,424,545	-				+1.6
4,424,594	+				+0.2
4,424,843	+		RR42_RS20425	0.31	+0.1
4,424,843	+		RR42_RS20425	0.31	+1.1
4,424,844	-		RR42_RS20425	0.31	+3.0
4,424,856	+		RR42_RS20425	0.32	+0.3
4,424,858	+		RR42_RS20425	0.33	+1.1
4,424,859	-		RR42_RS20425	0.33	+0.3
4,424,905	-		RR42_RS20425	0.40	+0.8
4,425,058	+		RR42_RS20425	0.62	+0.6
4,425,059	-		RR42_RS20425	0.63	-0.0
4,425,263	-				+0.4
4,425,263	-				-0.3
4,425,263	-				-1.2
4,425,340	+				-0.8
4,425,340	+				-1.1
4,425,341	-				-0.3
4,425,678	+				-0.2
4,425,678	+				+0.1
4,425,698	+				+0.1
4,425,698	+				-0.1
4,425,698	+				-0.3
4,425,699	-				-0.9
4,425,699	-				-1.8
4,425,776	+				-0.3
4,425,794	+				+0.2
4,425,797	+				-0.0
4,425,797	+				+0.7
4,425,797	+				-0.2
4,425,797	+				+1.5
4,425,798	-				-0.1
4,425,798	-				-0.1
4,425,798	-				+0.5
4,425,798	-				+0.0
4,425,798	-				-1.7
4,425,798	-				+0.2
4,425,800	+				+0.2
4,425,800	+				+0.1
4,425,801	-				-1.2
4,425,801	-				-0.9
4,425,801	-				-1.1