Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20240

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
4,376,554	-				-0.2
4,376,580	+				+0.2
4,376,580	+				-0.1
4,376,658	+		RR42_RS20235	0.14	+1.7
4,376,658	+		RR42_RS20235	0.14	+0.2
4,376,659	-		RR42_RS20235	0.14	-0.4
4,376,872	+		RR42_RS20235	0.43	+0.7
4,376,873	-		RR42_RS20235	0.43	+0.3
4,376,919	+		RR42_RS20235	0.49	+0.6
4,376,919	+		RR42_RS20235	0.49	+0.5
4,376,920	-		RR42_RS20235	0.49	-0.3
4,377,099	+		RR42_RS20235	0.74	-0.4
4,377,255	+				+1.2
4,377,287	-				-0.7
4,377,308	-				+0.2
4,377,325	+				-0.2
4,377,325	+				+0.7
4,377,386	+				+0.2
4,377,518	-		RR42_RS20240	0.12	+0.8
4,377,543	+		RR42_RS20240	0.13	+1.6
4,377,543	+		RR42_RS20240	0.13	+0.3
4,377,544	-		RR42_RS20240	0.13	+0.7
4,377,544	-		RR42_RS20240	0.13	-1.2
4,377,631	+		RR42_RS20240	0.18	-0.4
4,377,631	+		RR42_RS20240	0.18	-1.5
4,377,631	+		RR42_RS20240	0.18	+0.6
4,377,631	+		RR42_RS20240	0.18	+0.4
4,377,631	+		RR42_RS20240	0.18	-0.0
4,377,632	-		RR42_RS20240	0.18	+0.8
4,377,632	-		RR42_RS20240	0.18	-1.8
4,377,632	-		RR42_RS20240	0.18	+0.8
4,377,632	-		RR42_RS20240	0.18	-0.3
4,377,632	-		RR42_RS20240	0.18	-0.4
4,377,632	-		RR42_RS20240	0.18	+0.5
4,377,632	-		RR42_RS20240	0.18	-1.3
4,377,889	+		RR42_RS20240	0.33	-0.3
4,377,889	+		RR42_RS20240	0.33	-0.3
4,377,890	-		RR42_RS20240	0.33	+1.1
4,378,187	-		RR42_RS20240	0.49	-0.6
4,378,360	+		RR42_RS20240	0.59	+0.8
4,378,361	-		RR42_RS20240	0.59	-1.7
4,378,372	+		RR42_RS20240	0.60	+0.4
4,378,373	-		RR42_RS20240	0.60	+0.3
4,378,373	-		RR42_RS20240	0.60	-1.3
4,378,420	+		RR42_RS20240	0.62	-0.1
4,378,612	+		RR42_RS20240	0.73	-0.3
4,378,612	+		RR42_RS20240	0.73	+0.2
4,378,613	-		RR42_RS20240	0.73	-0.9
4,378,684	+		RR42_RS20240	0.77	+0.8
4,378,798	+		RR42_RS20240	0.83	-1.0
4,378,798	+		RR42_RS20240	0.83	+1.4
4,378,799	-		RR42_RS20240	0.84	-0.0
4,378,799	-		RR42_RS20240	0.84	+0.3
4,378,873	+		RR42_RS20240	0.88	-0.3
4,378,873	+		RR42_RS20240	0.88	-0.5
4,378,874	-		RR42_RS20240	0.88	-3.3
4,378,885	+		RR42_RS20240	0.88	-0.0
4,378,885	+		RR42_RS20240	0.88	-0.5
4,378,886	-		RR42_RS20240	0.88	+0.6
4,378,886	-		RR42_RS20240	0.88	+0.1
4,378,976	-				+0.6
4,378,976	-				+0.6
4,378,987	+				-0.8
4,378,987	+				-0.2
4,378,988	-				-1.1
4,378,988	-				-0.6
4,379,046	+				+0.1
4,379,105	+				-0.5
4,379,106	-				+0.4
4,379,213	+		RR42_RS20245	0.10	-1.0
4,379,213	-		RR42_RS20245	0.10	-0.6
4,379,214	-		RR42_RS20245	0.10	-0.6
4,379,261	+		RR42_RS20245	0.15	+0.3
4,379,330	+		RR42_RS20245	0.21	+0.2
4,379,331	-		RR42_RS20245	0.22	-1.0
4,379,331	-		RR42_RS20245	0.22	+0.4
4,379,504	+		RR42_RS20245	0.38	+0.1
4,379,504	+		RR42_RS20245	0.38	+0.8
4,379,504	+		RR42_RS20245	0.38	-0.7
4,379,504	+		RR42_RS20245	0.38	-0.1
4,379,505	-		RR42_RS20245	0.38	-0.1
4,379,530	+		RR42_RS20245	0.40	-0.2
4,379,717	+		RR42_RS20245	0.58	-2.6
4,379,787	+		RR42_RS20245	0.65	+0.5
4,379,787	+		RR42_RS20245	0.65	-0.3
4,379,788	-		RR42_RS20245	0.65	+0.1
4,379,788	-		RR42_RS20245	0.65	+0.9
4,379,788	-		RR42_RS20245	0.65	-0.6
4,379,849	+		RR42_RS20245	0.71	+0.8
4,379,849	+		RR42_RS20245	0.71	-2.8
4,379,850	-		RR42_RS20245	0.71	-0.1
4,379,850	-		RR42_RS20245	0.71	+0.1
4,379,850	-		RR42_RS20245	0.71	+1.4
4,379,927	+		RR42_RS20245	0.78	-0.0
4,379,927	+		RR42_RS20245	0.78	+0.5
4,379,927	+		RR42_RS20245	0.78	-0.9
4,379,927	+		RR42_RS20245	0.78	-0.7