Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19870

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
4,289,108	+		RR42_RS19865	0.37	-1.1
4,289,109	-		RR42_RS19865	0.37	-2.6
4,289,109	-		RR42_RS19865	0.37	+1.0
4,289,320	+		RR42_RS19865	0.53	-0.7
4,289,320	+		RR42_RS19865	0.53	+0.0
4,289,321	-		RR42_RS19865	0.53	-1.3
4,289,935	+				+0.9
4,290,899	+		RR42_RS19870	0.61	-0.5
4,290,900	-		RR42_RS19870	0.61	-0.8
4,290,900	-		RR42_RS19870	0.61	+0.1
4,290,900	-		RR42_RS19870	0.61	+0.1
4,291,128	-		RR42_RS19870	0.76	+1.0
4,291,128	-		RR42_RS19870	0.76	-0.5
4,291,323	-		RR42_RS19870	0.89	-0.2
4,291,517	+				-0.1
4,291,517	+				-0.7
4,291,517	+				+0.4
4,291,517	+				+1.7
4,291,518	-				-0.8
4,291,518	-				-0.7
4,291,518	-				-0.8
4,291,518	-				-0.4
4,291,520	-				-0.9
4,291,567	+				-2.3
4,291,567	+				+0.5
4,291,568	-				-0.0
4,291,616	+				-1.1
4,291,616	+				-1.0
4,291,616	+				+0.3
4,291,616	+				-0.3
4,291,617	-				+1.2
4,291,717	+		RR42_RS19875	0.15	+0.1
4,291,887	+		RR42_RS19875	0.34	-0.3
4,291,887	+		RR42_RS19875	0.34	-2.6
4,291,887	+		RR42_RS19875	0.34	-1.6
4,291,888	-		RR42_RS19875	0.34	-0.5
4,291,915	+		RR42_RS19875	0.37	-1.6
4,291,996	+		RR42_RS19875	0.46	-1.6
4,292,020	+		RR42_RS19875	0.49	-3.2
4,292,020	+		RR42_RS19875	0.49	-1.9
4,292,020	+		RR42_RS19875	0.49	-0.8
4,292,021	-		RR42_RS19875	0.49	+0.5
4,292,021	-		RR42_RS19875	0.49	-0.5
4,292,089	+		RR42_RS19875	0.57	-1.4
4,292,089	+		RR42_RS19875	0.57	+0.7
4,292,089	+		RR42_RS19875	0.57	-1.6
4,292,089	+		RR42_RS19875	0.57	-0.7
4,292,089	+		RR42_RS19875	0.57	+0.6
4,292,090	-		RR42_RS19875	0.57	-0.0
4,292,090	-		RR42_RS19875	0.57	+0.1
4,292,090	-		RR42_RS19875	0.57	-0.1
4,292,356	+		RR42_RS19875	0.87	-1.6
4,292,356	+		RR42_RS19875	0.87	-1.2
4,292,357	-		RR42_RS19875	0.87	-0.3