Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19005

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
4,115,964	+		RR42_RS19000	0.19	+0.2
4,115,965	-		RR42_RS19000	0.19	-0.7
4,115,974	-		RR42_RS19000	0.19	-0.2
4,116,070	+		RR42_RS19000	0.28	-0.3
4,116,149	+		RR42_RS19000	0.35	-0.8
4,116,297	+		RR42_RS19000	0.48	-1.1
4,116,298	-		RR42_RS19000	0.48	-0.4
4,116,298	-		RR42_RS19000	0.48	-0.2
4,116,492	-		RR42_RS19000	0.65	+0.4
4,116,492	-		RR42_RS19000	0.65	-0.8
4,116,735	+		RR42_RS19000	0.86	+1.4
4,116,735	+		RR42_RS19000	0.86	-0.4
4,116,735	+		RR42_RS19000	0.86	+0.3
4,116,736	-		RR42_RS19000	0.86	+0.2
4,116,736	-		RR42_RS19000	0.86	-0.8
4,116,736	-		RR42_RS19000	0.86	+0.3
4,116,858	+				-2.3
4,116,859	-				+0.6
4,117,015	-				+0.4
4,117,341	+		RR42_RS19005	0.34	-1.1
4,117,341	+		RR42_RS19005	0.34	-1.7
4,117,342	-		RR42_RS19005	0.34	-0.1
4,117,718	+		RR42_RS19005	0.68	-0.8
4,117,718	+		RR42_RS19005	0.68	+1.2
4,117,718	+		RR42_RS19005	0.68	-1.7
4,117,719	-		RR42_RS19005	0.68	-0.5
4,117,926	-		RR42_RS19005	0.87	-0.8
4,118,033	+				+1.2
4,118,179	+		RR42_RS19010	0.20	-0.5
4,118,179	+		RR42_RS19010	0.20	+0.9
4,118,179	+		RR42_RS19010	0.20	-0.1
4,118,179	+		RR42_RS19010	0.20	+1.2
4,118,179	+		RR42_RS19010	0.20	-1.1
4,118,180	-		RR42_RS19010	0.20	-1.3
4,118,182	+		RR42_RS19010	0.20	+0.3
4,118,182	+		RR42_RS19010	0.20	-0.3
4,118,183	-		RR42_RS19010	0.20	-0.0
4,118,183	-		RR42_RS19010	0.20	-0.5
4,118,183	-		RR42_RS19010	0.20	-0.8
4,118,262	+		RR42_RS19010	0.33	-1.0
4,118,262	+		RR42_RS19010	0.33	+0.6
4,118,262	+		RR42_RS19010	0.33	-1.1
4,118,263	-		RR42_RS19010	0.33	+0.2
4,118,263	-		RR42_RS19010	0.33	-0.8
4,118,365	-		RR42_RS19010	0.50	-1.0
4,118,531	-		RR42_RS19010	0.77	-0.7
4,118,580	+		RR42_RS19010	0.85	+0.1
4,118,736	+				-0.7
4,118,736	+				-0.1
4,118,736	+				+0.0
4,118,736	+				-0.0
4,118,736	+				-0.3
4,118,736	+				-0.2
4,118,736	+				-3.7
4,118,736	+				-0.6
4,118,736	+				-0.8
4,118,737	-				+0.5
4,118,737	-				+0.7
4,118,737	-				-0.2
4,118,737	-				-0.1
4,118,737	-				-1.0
4,118,737	-				-2.1
4,118,737	-				-1.2
4,118,737	-				+0.4
4,118,737	-				+0.6
4,118,737	-				-0.1
4,118,857	+				+1.4
4,118,857	+				-1.8
4,118,894	+				+0.1
4,118,895	-				-0.3
4,118,895	-				-0.8
4,118,895	-				+0.5
4,118,895	-				+1.4
4,118,920	-				+0.4