Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18685

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
4,046,925	-		RR42_RS18680	0.32	-0.3
4,046,925	-		RR42_RS18680	0.32	-0.4
4,046,951	+		RR42_RS18680	0.34	-0.2
4,046,982	+		RR42_RS18680	0.37	+0.9
4,047,017	-		RR42_RS18680	0.40	-0.6
4,047,062	-		RR42_RS18680	0.44	+0.4
4,047,091	+		RR42_RS18680	0.46	+0.8
4,047,236	+		RR42_RS18680	0.59	-0.2
4,047,313	+		RR42_RS18680	0.66	-0.6
4,047,339	+		RR42_RS18680	0.68	+0.8
4,047,401	+		RR42_RS18680	0.74	+0.4
4,047,402	-		RR42_RS18680	0.74	-0.3
4,047,428	-		RR42_RS18680	0.76	-0.3
4,047,531	-		RR42_RS18680	0.85	-0.1
4,047,531	-		RR42_RS18680	0.85	+0.5
4,047,531	-		RR42_RS18680	0.85	+0.4
4,047,533	+		RR42_RS18680	0.85	-0.8
4,047,533	+		RR42_RS18680	0.85	+0.3
4,047,534	-		RR42_RS18680	0.85	+0.2
4,047,574	+		RR42_RS18680	0.89	+0.2
4,047,575	-		RR42_RS18680	0.89	-1.2
4,047,595	+				+0.4
4,047,623	+				-0.2
4,047,664	+				+1.5
4,047,699	+				+0.4
4,047,700	-				+1.2
4,047,760	-				+0.4
4,047,798	+				+0.8
4,047,799	-				+0.7
4,047,799	-				-1.3
4,047,835	+				+1.2
4,047,835	+				-0.0
4,047,836	-				+0.2
4,047,850	+				+0.6
4,047,851	-				-0.4
4,047,886	-				+0.0
4,047,886	-				+1.1
4,047,892	+				+0.1
4,047,967	-				+0.1
4,048,021	+				-0.3
4,048,022	-				+0.4
4,048,022	-				+0.2
4,048,022	-				-0.8
4,048,022	-				-1.0
4,048,023	+				+0.2
4,048,023	+				+0.7
4,048,023	+				+0.1
4,048,023	+				-0.3
4,048,023	+				-0.6
4,048,023	+				-0.1
4,048,023	+				+0.2
4,048,024	-				-0.8
4,048,024	-				+0.8
4,048,024	-				+1.2
4,048,024	-				+0.6
4,048,235	+		RR42_RS18685	0.14	-0.3
4,048,488	+		RR42_RS18685	0.24	+0.7
4,048,489	-		RR42_RS18685	0.24	-0.0
4,048,500	+		RR42_RS18685	0.25	-0.3
4,048,500	+		RR42_RS18685	0.25	-0.0
4,048,776	+		RR42_RS18685	0.36	+0.5
4,048,777	-		RR42_RS18685	0.36	-1.4
4,048,779	+		RR42_RS18685	0.36	+1.4
4,048,779	+		RR42_RS18685	0.36	+1.0
4,048,780	-		RR42_RS18685	0.36	-0.0
4,048,780	-		RR42_RS18685	0.36	-0.5
4,048,783	+		RR42_RS18685	0.36	+0.5
4,048,784	-		RR42_RS18685	0.36	+0.3
4,048,784	-		RR42_RS18685	0.36	+0.6
4,048,784	-		RR42_RS18685	0.36	-0.3
4,048,870	+		RR42_RS18685	0.40	-1.0
4,048,950	+		RR42_RS18685	0.43	-2.1
4,048,951	-		RR42_RS18685	0.43	+2.1
4,049,059	-		RR42_RS18685	0.47	+0.6
4,049,208	+		RR42_RS18685	0.53	+0.0
4,049,209	-		RR42_RS18685	0.53	+1.7
4,049,366	+		RR42_RS18685	0.59	-0.0
4,049,366	+		RR42_RS18685	0.59	+0.2
4,049,366	+		RR42_RS18685	0.59	+0.5
4,049,366	+		RR42_RS18685	0.59	-0.1
4,049,366	+		RR42_RS18685	0.59	+0.5
4,049,569	+		RR42_RS18685	0.68	+1.2
4,049,703	+		RR42_RS18685	0.73	+0.6
4,049,703	+		RR42_RS18685	0.73	-0.1
4,049,704	-		RR42_RS18685	0.73	-1.0
4,049,704	-		RR42_RS18685	0.73	+0.6
4,049,751	+		RR42_RS18685	0.75	-0.6
4,049,751	+		RR42_RS18685	0.75	-3.2
4,049,751	+		RR42_RS18685	0.75	+0.4
4,049,751	+		RR42_RS18685	0.75	-0.3
4,049,752	-		RR42_RS18685	0.75	+1.0
4,049,752	-		RR42_RS18685	0.75	+0.1
4,049,752	-		RR42_RS18685	0.75	-1.6
4,049,752	-		RR42_RS18685	0.75	-0.5
4,049,752	-		RR42_RS18685	0.75	+1.1
4,049,764	+		RR42_RS18685	0.75	-1.1
4,049,764	+		RR42_RS18685	0.75	-0.0
4,049,765	-		RR42_RS18685	0.75	-2.6
4,049,765	-		RR42_RS18685	0.75	+0.7
4,049,868	+		RR42_RS18685	0.79	+0.1
4,049,869	-		RR42_RS18685	0.79	-0.2
4,049,874	+		RR42_RS18685	0.80	+1.2
4,049,941	+		RR42_RS18685	0.82	-1.3
4,049,942	-		RR42_RS18685	0.82	+0.1
4,049,959	+		RR42_RS18685	0.83	-0.4
4,050,021	+		RR42_RS18685	0.86	+0.1
4,050,108	+		RR42_RS18685	0.89	-0.2
4,050,108	+		RR42_RS18685	0.89	+0.6
4,050,108	+		RR42_RS18685	0.89	-0.6
4,050,108	+		RR42_RS18685	0.89	+0.1
4,050,108	+		RR42_RS18685	0.89	-0.2
4,050,108	+		RR42_RS18685	0.89	+0.7
4,050,109	-		RR42_RS18685	0.89	+0.1
4,050,109	-		RR42_RS18685	0.89	+0.2
4,050,109	-		RR42_RS18685	0.89	+0.5
4,050,112	+		RR42_RS18685	0.89	+1.5
4,050,112	+		RR42_RS18685	0.89	+1.1
4,050,113	-		RR42_RS18685	0.89	+0.7
4,050,113	-		RR42_RS18685	0.89	-0.2
4,050,113	-		RR42_RS18685	0.89	+0.7
4,050,113	-		RR42_RS18685	0.89	+0.9
4,050,141	+				+0.7
4,050,156	+				+0.4
4,050,291	+				+0.8
4,050,291	+				-0.4
4,050,292	-				-0.2
4,050,292	-				-0.8
4,050,292	-				+0.1
4,050,292	-				-0.3
4,050,359	+				+0.2
4,050,359	+				+0.9
4,050,384	+				-0.3
4,050,454	+				+0.0
4,050,454	+				-0.3
4,050,456	-				-0.2
4,050,512	-				+0.1
4,050,547	-				-0.8
4,050,589	+				-1.2
4,050,589	+				-0.9
4,050,591	+				-1.0