Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18440

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,992,499	+				-1.5
3,992,499	+				-0.2
3,992,499	+				-0.1
3,992,500	-				+1.0
3,992,512	+				-0.5
3,992,512	+				-0.3
3,992,512	+				+1.5
3,992,513	-				+0.3
3,992,513	-				-0.5
3,992,513	-				+0.3
3,992,513	-				+0.2
3,992,513	-				+1.2
3,992,513	-				+0.2
3,992,558	-				+0.1
3,992,578	-				-0.0
3,992,595	+				+1.6
3,992,596	-				+1.1
3,992,604	+				-0.8
3,992,605	-				-0.5
3,992,614	+				-0.2
3,992,626	+				+0.3
3,992,626	+				-2.2
3,992,626	+				+0.2
3,992,765	-		RR42_RS18430	0.50	+1.1
3,992,765	-		RR42_RS18430	0.50	+0.3
3,992,899	-				+0.8
3,992,919	+				-0.2
3,992,920	-				+0.6
3,992,920	-				+0.0
3,992,979	+		RR42_RS18435	0.19	-1.0
3,992,979	+		RR42_RS18435	0.19	+0.9
3,992,979	+		RR42_RS18435	0.19	+0.2
3,992,979	+		RR42_RS18435	0.19	-0.7
3,992,979	+		RR42_RS18435	0.19	-2.5
3,992,979	+		RR42_RS18435	0.19	+0.0
3,992,980	-		RR42_RS18435	0.19	+0.6
3,992,980	-		RR42_RS18435	0.19	-0.3
3,992,980	-		RR42_RS18435	0.19	+0.2
3,992,980	-		RR42_RS18435	0.19	+1.4
3,992,980	-		RR42_RS18435	0.19	+0.6
3,992,980	-		RR42_RS18435	0.19	+0.3
3,992,980	-		RR42_RS18435	0.19	-0.1
3,993,026	+		RR42_RS18435	0.30	+1.3
3,993,027	-		RR42_RS18435	0.31	+0.7
3,993,027	-		RR42_RS18435	0.31	+0.9
3,993,027	-		RR42_RS18435	0.31	-0.5
3,993,027	-		RR42_RS18435	0.31	+1.6
3,993,135	+		RR42_RS18435	0.57	+0.3
3,993,136	-		RR42_RS18435	0.57	+0.5
3,993,136	-		RR42_RS18435	0.57	+0.3
3,993,136	-		RR42_RS18435	0.57	+1.3
3,993,146	-		RR42_RS18435	0.59	+0.4
3,993,196	+		RR42_RS18435	0.71	+0.2
3,993,221	+		RR42_RS18435	0.78	+0.8
3,993,221	+		RR42_RS18435	0.78	-0.1
3,993,221	+		RR42_RS18435	0.78	+3.6
3,993,221	+		RR42_RS18435	0.78	+0.4
3,993,221	+		RR42_RS18435	0.78	+0.3
3,993,222	-		RR42_RS18435	0.78	-0.9
3,993,222	-		RR42_RS18435	0.78	-0.7
3,993,222	-		RR42_RS18435	0.78	+0.1
3,993,222	-		RR42_RS18435	0.78	+0.6
3,993,277	+				+0.4
3,993,278	-				-0.4
3,993,406	+				+0.1
3,993,553	+		RR42_RS18440	0.24	-0.3
3,993,553	+		RR42_RS18440	0.24	+0.7
3,993,553	+		RR42_RS18440	0.24	+0.3
3,993,554	-		RR42_RS18440	0.24	-0.1
3,993,568	-		RR42_RS18440	0.27	+0.4
3,993,568	-		RR42_RS18440	0.27	+0.8
3,993,784	+		RR42_RS18440	0.70	+1.5
3,993,784	+		RR42_RS18440	0.70	+0.3
3,993,784	+		RR42_RS18440	0.70	-1.9
3,993,784	+		RR42_RS18440	0.70	-1.3
3,993,784	+		RR42_RS18440	0.70	-0.4
3,993,785	-		RR42_RS18440	0.70	+0.4
3,993,785	-		RR42_RS18440	0.70	-0.1
3,993,785	-		RR42_RS18440	0.70	-0.5
3,993,832	+		RR42_RS18440	0.80	+1.2
3,993,918	+				-0.2
3,993,918	+				+1.3
3,993,919	-				+0.1
3,994,044	+		RR42_RS18445	0.10	-0.1
3,994,044	+		RR42_RS18445	0.10	+0.7
3,994,044	+		RR42_RS18445	0.10	-0.8
3,994,044	+		RR42_RS18445	0.10	+1.6
3,994,045	-		RR42_RS18445	0.10	+0.7
3,994,048	-		RR42_RS18445	0.11	-0.5
3,994,054	+		RR42_RS18445	0.11	+0.7
3,994,055	-		RR42_RS18445	0.11	+0.6
3,994,220	+		RR42_RS18445	0.26	-0.5
3,994,220	+		RR42_RS18445	0.26	+0.1
3,994,220	+		RR42_RS18445	0.26	+1.3
3,994,221	-		RR42_RS18445	0.26	+0.2
3,994,221	-		RR42_RS18445	0.26	+0.6
3,994,221	-		RR42_RS18445	0.26	-0.0
3,994,221	-		RR42_RS18445	0.26	-1.3
3,994,293	+		RR42_RS18445	0.32	-0.9
3,994,293	+		RR42_RS18445	0.32	-0.2
3,994,293	+		RR42_RS18445	0.32	-2.6
3,994,293	+		RR42_RS18445	0.32	-1.0
3,994,294	-		RR42_RS18445	0.33	+0.8
3,994,294	-		RR42_RS18445	0.33	+0.2
3,994,583	+		RR42_RS18445	0.58	+0.3
3,994,632	+		RR42_RS18445	0.63	-0.6
3,994,632	+		RR42_RS18445	0.63	+0.7
3,994,632	+		RR42_RS18445	0.63	+0.4
3,994,632	+		RR42_RS18445	0.63	-2.0
3,994,632	+		RR42_RS18445	0.63	+0.3
3,994,632	+		RR42_RS18445	0.63	+0.2
3,994,632	+		RR42_RS18445	0.63	+0.4
3,994,632	+		RR42_RS18445	0.63	-2.0
3,994,633	-		RR42_RS18445	0.63	+0.7
3,994,633	-		RR42_RS18445	0.63	+1.2
3,994,633	-		RR42_RS18445	0.63	+0.1
3,994,633	-		RR42_RS18445	0.63	-1.0
3,994,633	-		RR42_RS18445	0.63	-0.3
3,994,719	+		RR42_RS18445	0.70	-0.3