Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17340

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,752,464	+		RR42_RS17330	0.60	-0.4
3,752,465	-		RR42_RS17330	0.60	+1.2
3,752,468	+		RR42_RS17330	0.61	+0.7
3,752,468	+		RR42_RS17330	0.61	+2.2
3,752,468	+		RR42_RS17330	0.61	-0.4
3,752,468	+		RR42_RS17330	0.61	+0.0
3,752,469	-		RR42_RS17330	0.61	+0.7
3,752,574	+		RR42_RS17330	0.87	-1.2
3,752,574	+		RR42_RS17330	0.87	+0.6
3,752,574	+		RR42_RS17330	0.87	+1.6
3,752,574	+		RR42_RS17330	0.87	-0.8
3,752,574	+		RR42_RS17330	0.87	-0.1
3,752,575	-		RR42_RS17330	0.87	+0.6
3,752,622	-				+0.5
3,752,622	-				+0.3
3,752,622	-				+0.1
3,752,654	+				-0.4
3,752,662	+				-2.3
3,752,663	-				-1.0
3,752,663	-				+0.6
3,752,663	-				-1.4
3,752,724	-				-0.4
3,752,875	+		RR42_RS17335	0.28	+2.2
3,753,146	-		RR42_RS17335	0.67	-0.2
3,753,213	+		RR42_RS17335	0.77	+0.2
3,753,213	+		RR42_RS17335	0.77	-0.8
3,753,214	-		RR42_RS17335	0.77	+0.8
3,753,214	-		RR42_RS17335	0.77	+0.6
3,753,254	-		RR42_RS17335	0.83	+1.9
3,753,486	-		RR42_RS17340	0.14	-1.2
3,753,590	+		RR42_RS17340	0.35	-0.2
3,753,606	+		RR42_RS17340	0.38	-1.3
3,753,755	+		RR42_RS17340	0.68	+1.8
3,753,785	+		RR42_RS17340	0.75	-1.9
3,753,897	-				+0.6
3,753,897	-				-0.1
3,753,897	-				+0.6
3,753,968	+				+0.4
3,753,968	+				-0.2
3,753,969	-				+0.3
3,753,977	+				+0.1
3,754,115	+		RR42_RS17345	0.11	+0.8
3,754,116	-		RR42_RS17345	0.11	+0.1
3,754,116	-		RR42_RS17345	0.11	-0.5
3,754,116	-		RR42_RS17345	0.11	-0.3
3,754,136	+		RR42_RS17345	0.12	+1.4
3,754,461	-		RR42_RS17345	0.41	-1.6
3,754,472	+		RR42_RS17345	0.42	-1.9
3,754,619	+		RR42_RS17345	0.55	+0.1
3,754,656	-		RR42_RS17345	0.58	+0.4