Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16940

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,665,506	+		RR42_RS16935	0.16	-0.3
3,665,506	+		RR42_RS16935	0.16	-0.4
3,665,506	+		RR42_RS16935	0.16	-0.8
3,665,506	+		RR42_RS16935	0.16	+0.6
3,665,507	-		RR42_RS16935	0.16	+0.7
3,665,507	-		RR42_RS16935	0.16	+0.7
3,665,553	+		RR42_RS16935	0.21	-0.4
3,665,553	+		RR42_RS16935	0.21	-1.1
3,665,554	-		RR42_RS16935	0.22	-1.5
3,665,554	-		RR42_RS16935	0.22	+0.0
3,665,554	-		RR42_RS16935	0.22	-0.1
3,665,554	-		RR42_RS16935	0.22	+1.3
3,665,554	-		RR42_RS16935	0.22	-0.2
3,665,554	-		RR42_RS16935	0.22	-0.6
3,665,661	+		RR42_RS16935	0.34	-0.5
3,665,662	-		RR42_RS16935	0.34	+0.8
3,665,820	+		RR42_RS16935	0.52	-0.1
3,665,869	-		RR42_RS16935	0.58	+1.0
3,665,939	+		RR42_RS16935	0.66	+0.4
3,665,940	-		RR42_RS16935	0.66	+0.2
3,665,971	-		RR42_RS16935	0.69	+0.3
3,665,981	+		RR42_RS16935	0.70	-0.5
3,665,981	+		RR42_RS16935	0.70	-0.9
3,665,981	+		RR42_RS16935	0.70	-1.9
3,665,981	+		RR42_RS16935	0.70	+0.5
3,665,982	-		RR42_RS16935	0.71	-0.9
3,665,982	-		RR42_RS16935	0.71	-0.3
3,665,982	-		RR42_RS16935	0.71	-0.0
3,666,253	+				-0.7
3,666,253	+				-1.1
3,666,254	-				-0.3
3,666,275	-				+0.8
3,666,375	-		RR42_RS16940	0.13	-0.1
3,666,511	+		RR42_RS16940	0.27	+0.1
3,666,511	+		RR42_RS16940	0.27	+1.5
3,666,512	-		RR42_RS16940	0.27	-1.2
3,666,596	-		RR42_RS16940	0.35	+1.2
3,666,655	+		RR42_RS16940	0.41	+1.2
3,666,656	-		RR42_RS16940	0.42	-0.6
3,666,665	-		RR42_RS16940	0.42	+0.2
3,666,665	-		RR42_RS16940	0.42	+1.4
3,666,665	-		RR42_RS16940	0.42	+0.3
3,666,665	-		RR42_RS16940	0.42	-0.1
3,666,790	+		RR42_RS16940	0.55	+0.4
3,666,894	-		RR42_RS16940	0.66	+1.2
3,667,179	+				+1.2
3,667,192	-				-0.5
3,667,199	+				-0.5
3,667,200	-				+0.2
3,667,306	-				-0.2
3,667,337	+				-1.2
3,667,337	+				+0.3
3,667,338	-				-0.4
3,667,338	-				-1.6
3,667,338	-				-0.4
3,667,349	-				-0.4
3,667,349	-				+2.1
3,667,352	+				-0.7
3,667,410	+				+0.5
3,667,411	-				-0.8
3,667,411	-				+0.3
3,667,411	-				-0.6
3,667,461	+				+0.1
3,667,578	-				+1.2
3,667,688	-				+1.2
3,667,884	-		RR42_RS16945	0.20	-0.3
3,667,998	+		RR42_RS16945	0.31	+1.7
3,667,998	+		RR42_RS16945	0.31	-0.5
3,667,998	+		RR42_RS16945	0.31	+0.1
3,667,999	-		RR42_RS16945	0.31	-1.0
3,668,000	+		RR42_RS16945	0.32	+0.2
3,668,000	+		RR42_RS16945	0.32	+0.7
3,668,000	+		RR42_RS16945	0.32	-1.1
3,668,000	+		RR42_RS16945	0.32	+0.6
3,668,001	-		RR42_RS16945	0.32	+1.2
3,668,001	-		RR42_RS16945	0.32	+0.1
3,668,001	-		RR42_RS16945	0.32	-0.7
3,668,001	-		RR42_RS16945	0.32	+1.0
3,668,001	-		RR42_RS16945	0.32	+0.6
3,668,072	+		RR42_RS16945	0.39	+1.2
3,668,072	+		RR42_RS16945	0.39	-0.1
3,668,073	-		RR42_RS16945	0.39	+0.2