Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16060

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,478,683	+				+0.8
3,478,683	+				+0.2
3,478,683	+				-0.0
3,478,683	+				+0.5
3,478,684	-				-0.9
3,478,684	-				+0.1
3,478,684	-				+0.1
3,478,684	-				+0.6
3,478,684	-				+1.0
3,478,684	-				+0.9
3,478,684	-				+0.0
3,478,684	-				-0.8
3,478,851	-				-1.2
3,478,967	+				+0.2
3,479,033	+				-0.0
3,479,033	+				-0.3
3,479,257	+				+0.6
3,479,294	-		RR42_RS16060	0.13	-0.7
3,479,294	-		RR42_RS16060	0.13	-0.6
3,479,305	-		RR42_RS16060	0.14	+0.8
3,479,305	-		RR42_RS16060	0.14	+0.8
3,479,375	-		RR42_RS16060	0.20	+0.7
3,479,502	+		RR42_RS16060	0.30	-0.5
3,479,503	-		RR42_RS16060	0.31	+0.6
3,479,540	+		RR42_RS16060	0.34	+0.4
3,479,540	+		RR42_RS16060	0.34	+1.2
3,479,540	+		RR42_RS16060	0.34	+1.8
3,479,540	+		RR42_RS16060	0.34	-0.6
3,479,541	-		RR42_RS16060	0.34	+0.1
3,479,541	-		RR42_RS16060	0.34	-0.6
3,479,541	-		RR42_RS16060	0.34	+1.2
3,479,541	-		RR42_RS16060	0.34	+0.8
3,479,541	-		RR42_RS16060	0.34	-0.0
3,479,719	+		RR42_RS16060	0.49	-0.1
3,479,719	+		RR42_RS16060	0.49	+0.3
3,479,720	-		RR42_RS16060	0.49	+0.3
3,479,880	+		RR42_RS16060	0.63	-0.9
3,480,028	-		RR42_RS16060	0.75	-2.0
3,480,038	-		RR42_RS16060	0.76	-0.8
3,480,087	+		RR42_RS16060	0.80	+1.2
3,480,087	+		RR42_RS16060	0.80	+0.6
3,480,152	+		RR42_RS16060	0.86	+0.8
3,480,153	-		RR42_RS16060	0.86	-1.3
3,480,153	-		RR42_RS16060	0.86	-0.4
3,480,274	-				+0.3
3,480,431	+				-1.0
3,480,431	+				-0.6
3,480,432	-				-0.1
3,480,631	+		RR42_RS16065	0.15	+1.8
3,480,631	+		RR42_RS16065	0.15	+0.7
3,480,631	+		RR42_RS16065	0.15	+1.5
3,480,632	-		RR42_RS16065	0.15	+0.1
3,480,632	-		RR42_RS16065	0.15	+0.7
3,480,805	+		RR42_RS16065	0.45	-0.1
3,480,806	-		RR42_RS16065	0.45	+0.5
3,480,806	-		RR42_RS16065	0.45	+0.5
3,480,814	+		RR42_RS16065	0.46	+0.2
3,480,814	+		RR42_RS16065	0.46	+1.2
3,480,815	-		RR42_RS16065	0.47	+0.5
3,480,815	-		RR42_RS16065	0.47	+0.8
3,480,931	+		RR42_RS16065	0.66	+0.9
3,480,931	+		RR42_RS16065	0.66	+1.0
3,480,932	-		RR42_RS16065	0.67	+0.1
3,480,932	-		RR42_RS16065	0.67	-0.4
3,481,209	+		RR42_RS16070	0.20	+0.0
3,481,209	+		RR42_RS16070	0.20	+0.0
3,481,209	+		RR42_RS16070	0.20	-0.9
3,481,209	+		RR42_RS16070	0.20	+0.2
3,481,209	+		RR42_RS16070	0.20	+0.9
3,481,210	-		RR42_RS16070	0.21	+0.2
3,481,210	-		RR42_RS16070	0.21	+0.0