Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15790

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,411,772	-		RR42_RS15785	0.16	-0.3
3,411,772	-		RR42_RS15785	0.16	-1.2
3,411,774	-		RR42_RS15785	0.16	+0.5
3,411,949	-		RR42_RS15785	0.32	-2.1
3,411,949	-		RR42_RS15785	0.32	-0.3
3,411,949	-		RR42_RS15785	0.32	-2.2
3,411,976	+		RR42_RS15785	0.35	-1.9
3,412,090	-		RR42_RS15785	0.45	-2.2
3,412,182	-		RR42_RS15785	0.53	-1.8
3,412,249	-		RR42_RS15785	0.60	+1.3
3,412,251	-		RR42_RS15785	0.60	-1.4
3,412,253	+		RR42_RS15785	0.60	-1.5
3,412,253	+		RR42_RS15785	0.60	-2.0
3,412,253	+		RR42_RS15785	0.60	-1.8
3,412,254	-		RR42_RS15785	0.60	-0.7
3,412,368	-		RR42_RS15785	0.71	-1.3
3,412,368	-		RR42_RS15785	0.71	-2.5
3,412,368	-		RR42_RS15785	0.71	-1.9
3,412,835	-		RR42_RS15790	0.11	-1.6
3,412,835	-		RR42_RS15790	0.11	-3.0
3,413,456	-		RR42_RS15790	0.59	-1.7
3,413,456	-		RR42_RS15790	0.59	-1.8
3,413,525	-		RR42_RS15790	0.65	-3.6
3,413,817	-		RR42_RS15790	0.87	-2.3
3,413,817	-		RR42_RS15790	0.87	-1.5
3,413,817	-		RR42_RS15790	0.87	-1.6
3,413,841	-		RR42_RS15790	0.89	-2.5
3,413,864	-				-1.0
3,413,864	-				-1.2
3,414,003	-				+2.6
3,414,005	+				-1.3
3,414,018	-				+0.6
3,414,018	-				-0.7
3,414,364	-		RR42_RS15795	0.49	-1.5
3,414,364	-		RR42_RS15795	0.49	-1.8
3,414,368	-		RR42_RS15795	0.49	-1.7
3,414,368	-		RR42_RS15795	0.49	-1.0
3,414,368	-		RR42_RS15795	0.49	-0.3
3,414,368	-		RR42_RS15795	0.49	-2.8
3,414,511	-		RR42_RS15795	0.68	-1.8
3,414,511	-		RR42_RS15795	0.68	-2.1
3,414,567	-		RR42_RS15795	0.75	-3.3
3,414,657	-		RR42_RS15795	0.87	+0.5
3,414,699	-				-0.9
3,414,817	-				-2.9
3,414,884	-		RR42_RS15800	0.14	-1.5
3,414,902	-		RR42_RS15800	0.16	-2.0