Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15520

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,353,237	+		RR42_RS15515	0.81	+0.9
3,353,237	+		RR42_RS15515	0.81	-2.8
3,353,238	-		RR42_RS15515	0.81	-0.1
3,353,510	+		RR42_RS15515	0.86	-0.2
3,353,564	-		RR42_RS15515	0.87	-0.3
3,353,672	+		RR42_RS15515	0.90	-1.2
3,353,673	-		RR42_RS15515	0.90	-0.7
3,353,684	+		RR42_RS15515	0.90	+1.3
3,353,685	-		RR42_RS15515	0.90	+1.0
3,353,685	-		RR42_RS15515	0.90	+0.3
3,353,714	+				+0.8
3,353,715	-				-1.6
3,353,741	+				-0.4
3,353,742	-				+0.2
3,353,792	+				+1.0
3,353,792	+				+0.1
3,353,818	+				+0.9
3,353,818	+				+1.1
3,353,819	-				+1.1
3,353,819	-				-0.3
3,353,934	+				+0.5
3,353,935	-				-0.1
3,354,028	+				+1.3
3,354,028	+				-0.1
3,354,029	-				+0.6
3,354,180	+				+1.4
3,354,180	+				+1.3
3,354,181	-				+0.6
3,354,181	-				+2.5
3,354,201	+				-1.1
3,354,218	+				+0.4
3,354,219	-				+1.9
3,354,219	-				+0.0
3,354,219	-				+1.3
3,354,249	+				+1.2
3,354,325	+		RR42_RS15520	0.27	+0.3
3,354,325	+		RR42_RS15520	0.27	+0.3
3,354,326	-		RR42_RS15520	0.27	-0.4
3,354,326	-		RR42_RS15520	0.27	+1.3
3,354,397	+		RR42_RS15520	0.44	-1.2
3,354,415	+		RR42_RS15520	0.48	-0.1
3,354,415	+		RR42_RS15520	0.48	-0.2
3,354,481	+		RR42_RS15520	0.63	-0.7
3,354,482	-		RR42_RS15520	0.63	-0.1
3,354,526	+		RR42_RS15520	0.74	-0.7
3,354,526	+		RR42_RS15520	0.74	-0.4
3,354,527	-		RR42_RS15520	0.74	+0.8
3,354,527	-		RR42_RS15520	0.74	+0.2
3,354,527	-		RR42_RS15520	0.74	+0.4
3,354,715	+				-0.5
3,354,716	-				-0.1
3,354,756	-				+0.5
3,354,790	+				+0.8
3,354,998	-		RR42_RS15525	0.39	-2.2
3,355,378	-		RR42_RS15530	0.12	+0.1
3,355,458	-		RR42_RS15530	0.21	-1.1
3,355,556	+		RR42_RS15530	0.31	+0.4
3,355,557	-		RR42_RS15530	0.32	-0.8