Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15460

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,339,069	+		RR42_RS15450	0.47	-0.7
3,339,070	-		RR42_RS15450	0.47	-1.9
3,339,166	-		RR42_RS15450	0.60	-2.2
3,339,439	+				-2.4
3,339,439	+				-2.9
3,339,439	+				-2.4
3,339,492	+				-2.1
3,339,493	-				+0.2
3,339,493	-				-1.8
3,339,493	-				-1.0
3,339,495	+				-3.6
3,339,495	+				-2.9
3,339,495	+				-4.3
3,339,496	-				-0.7
3,339,496	-				-0.9
3,339,496	-				-0.9
3,339,496	-				-1.0
3,339,663	+		RR42_RS15455	0.34	-1.1
3,339,762	+		RR42_RS15455	0.53	-2.5
3,339,780	+		RR42_RS15455	0.57	-3.0
3,339,781	-		RR42_RS15455	0.57	-4.1
3,339,781	-		RR42_RS15455	0.57	-3.9
3,339,781	-		RR42_RS15455	0.57	-2.2
3,339,781	-		RR42_RS15455	0.57	-1.1
3,339,781	-		RR42_RS15455	0.57	-1.1
3,339,798	+		RR42_RS15455	0.61	-4.2
3,339,799	-		RR42_RS15455	0.61	-3.1
3,339,892	+		RR42_RS15455	0.79	-0.3
3,339,997	+				-4.1
3,340,011	-				-2.3
3,340,026	-				+0.3
3,340,026	-				-1.4
3,340,319	+		RR42_RS15460	0.22	-0.7
3,340,418	+		RR42_RS15460	0.30	-0.7
3,340,418	+		RR42_RS15460	0.30	-2.2
3,340,418	+		RR42_RS15460	0.30	-0.7
3,340,419	+		RR42_RS15460	0.30	-1.6
3,340,525	-		RR42_RS15460	0.38	-0.4
3,340,679	+		RR42_RS15460	0.49	-2.2
3,340,679	+		RR42_RS15460	0.49	-3.4
3,340,680	-		RR42_RS15460	0.49	-2.1
3,340,680	-		RR42_RS15460	0.49	-2.4
3,340,811	+		RR42_RS15460	0.59	-2.1
3,340,812	-		RR42_RS15460	0.59	-1.2
3,340,956	-		RR42_RS15460	0.70	-1.9
3,340,956	-		RR42_RS15460	0.70	-2.4
3,340,992	+		RR42_RS15460	0.73	-2.4
3,341,375	+				-3.1
3,341,526	-				+0.2
3,341,526	-				-1.1
3,341,526	-				+0.5
3,341,535	+				-2.1
3,341,535	+				-1.3
3,341,536	-				+0.6
3,341,576	+				-3.1
3,341,577	-				-0.1
3,341,583	+				-2.7
3,342,166	+		RR42_RS15465	0.51	-1.7
3,342,167	-		RR42_RS15465	0.51	-0.3