Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14935

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,228,220	-		RR42_RS14925	0.38	-0.3
3,228,220	-		RR42_RS14925	0.38	-0.3
3,228,220	-		RR42_RS14925	0.38	-0.8
3,228,228	+		RR42_RS14925	0.39	+2.3
3,228,476	-		RR42_RS14925	0.76	-0.5
3,228,769	+		RR42_RS14930	0.20	-0.1
3,228,769	+		RR42_RS14930	0.20	-1.5
3,228,770	-		RR42_RS14930	0.20	-0.2
3,229,090	+				+0.3
3,229,090	+				-0.3
3,229,244	-				-0.5
3,229,579	+		RR42_RS14935	0.26	+0.5
3,229,579	+		RR42_RS14935	0.26	-1.5
3,230,254	+		RR42_RS14935	0.63	+0.4
3,230,254	+		RR42_RS14935	0.63	-0.7
3,230,494	+		RR42_RS14935	0.77	+0.6
3,230,551	+		RR42_RS14935	0.80	+0.1
3,230,551	+		RR42_RS14935	0.80	+2.3
3,230,552	-		RR42_RS14935	0.80	+0.1
3,230,554	+		RR42_RS14935	0.80	+0.7
3,230,825	-				+1.3
3,230,930	-				-1.0
3,230,930	-				-0.2
3,230,949	+				-0.3
3,230,949	+				-1.1
3,230,950	-				+0.3
3,230,985	-				+0.7
3,230,985	-				-0.1
3,231,112	+				-1.1
3,231,191	+		RR42_RS14940	0.13	+1.3
3,231,192	-		RR42_RS14940	0.13	+0.5
3,231,192	-		RR42_RS14940	0.13	+1.3
3,231,269	+		RR42_RS14940	0.18	-1.4
3,231,270	-		RR42_RS14940	0.18	-2.2
3,231,411	-		RR42_RS14940	0.27	+0.7
3,231,462	-		RR42_RS14940	0.30	+0.4
3,231,462	-		RR42_RS14940	0.30	+0.4
3,231,545	+		RR42_RS14940	0.36	-0.2
3,231,545	+		RR42_RS14940	0.36	+0.3
3,231,546	-		RR42_RS14940	0.36	-0.4
3,231,546	-		RR42_RS14940	0.36	-0.1
3,231,600	-		RR42_RS14940	0.39	+2.3
3,231,600	-		RR42_RS14940	0.39	-1.3
3,231,615	+		RR42_RS14940	0.40	+0.9
3,231,713	+		RR42_RS14940	0.46	-0.1
3,231,752	-		RR42_RS14940	0.49	-0.5