Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14790

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,185,794	+				-0.2
3,185,858	+				+0.5
3,185,859	-				+1.0
3,185,864	+				+2.9
3,185,943	+		RR42_RS14785	0.30	-0.4
3,185,944	-		RR42_RS14785	0.30	+1.1
3,186,042	-		RR42_RS14785	0.62	-0.5
3,186,042	-		RR42_RS14785	0.62	-1.2
3,186,042	-		RR42_RS14785	0.62	-0.1
3,186,042	-		RR42_RS14785	0.62	+0.5
3,186,318	+				-0.2
3,186,319	-				-1.0
3,186,319	-				-1.3
3,186,392	+		RR42_RS14790	0.17	-1.0
3,186,392	+		RR42_RS14790	0.17	-1.1
3,186,392	+		RR42_RS14790	0.17	-1.9
3,186,393	-		RR42_RS14790	0.17	-0.3
3,186,393	-		RR42_RS14790	0.17	-1.5
3,186,551	+		RR42_RS14790	0.33	-3.7
3,186,551	+		RR42_RS14790	0.33	-2.0
3,186,552	-		RR42_RS14790	0.33	-2.2
3,186,626	+		RR42_RS14790	0.40	+0.5
3,186,627	-		RR42_RS14790	0.40	-1.5
3,186,702	-		RR42_RS14790	0.48	-3.0
3,186,702	-		RR42_RS14790	0.48	-1.1
3,186,716	+		RR42_RS14790	0.49	-1.7
3,186,717	-		RR42_RS14790	0.49	-1.0
3,186,717	-		RR42_RS14790	0.49	-1.9
3,186,717	-		RR42_RS14790	0.49	-0.7
3,186,963	-		RR42_RS14790	0.74	-1.6
3,186,963	-		RR42_RS14790	0.74	-1.6
3,187,019	+		RR42_RS14790	0.80	-0.4
3,187,020	-		RR42_RS14790	0.80	-1.5
3,187,020	-		RR42_RS14790	0.80	-1.1
3,187,145	+				+0.3
3,187,145	+				-1.7
3,187,146	-				-1.0
3,187,146	-				-0.6
3,187,207	+				+5.4
3,187,208	-				-0.5
3,187,208	-				-2.1
3,187,280	+				-1.0
3,187,281	-				-0.8
3,187,284	+				-2.9
3,187,285	-				-0.3
3,187,297	+				-3.3
3,187,297	+				+0.3
3,187,298	-				+0.3
3,187,298	-				-0.8
3,187,302	+				-0.4
3,187,303	-				+0.2
3,187,518	-		RR42_RS14795	0.20	+1.3
3,187,518	-		RR42_RS14795	0.20	+1.4
3,187,518	-		RR42_RS14795	0.20	-0.1
3,187,580	+		RR42_RS14795	0.29	-0.3
3,187,767	-		RR42_RS14795	0.56	-0.4
3,187,877	+		RR42_RS14795	0.71	-0.3
3,187,877	+		RR42_RS14795	0.71	+0.9
3,187,877	+		RR42_RS14795	0.71	-0.4
3,187,877	+		RR42_RS14795	0.71	-2.2
3,187,877	+		RR42_RS14795	0.71	-0.2
3,187,878	-		RR42_RS14795	0.72	-0.6
3,187,878	-		RR42_RS14795	0.72	-1.9
3,187,878	-		RR42_RS14795	0.72	-0.3
3,187,988	+		RR42_RS14795	0.87	+0.4
3,187,988	+		RR42_RS14795	0.87	-0.0
3,187,989	-		RR42_RS14795	0.87	+0.9
3,187,989	-		RR42_RS14795	0.87	+0.8
3,187,989	-		RR42_RS14795	0.87	+0.1
3,187,989	-		RR42_RS14795	0.87	+0.5
3,187,989	-		RR42_RS14795	0.87	+0.8
3,187,989	-		RR42_RS14795	0.87	+0.4
3,187,989	-		RR42_RS14795	0.87	-0.7
3,187,992	-		RR42_RS14795	0.88	-0.6
3,188,010	+				+1.0
3,188,010	+				-1.7
3,188,010	+				+0.4
3,188,011	-				+0.1
3,188,011	-				+0.0
3,188,011	-				+0.5
3,188,011	-				-0.4
3,188,011	-				-0.0
3,188,011	-				-0.4
3,188,015	+				+1.0
3,188,042	+				-1.3
3,188,043	-				+0.1
3,188,120	+				-0.1
3,188,121	-				-0.3
3,188,180	-				+0.1
3,188,200	-				-0.2