Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14410

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,098,133	+				+0.3
3,098,134	-				+0.4
3,098,251	+				-0.4
3,098,252	-				+0.5
3,098,330	-		RR42_RS14405	0.13	+2.5
3,098,590	+		RR42_RS14405	0.50	-0.6
3,098,591	-		RR42_RS14405	0.50	-1.3
3,098,591	-		RR42_RS14405	0.50	+0.6
3,098,591	-		RR42_RS14405	0.50	+0.5
3,098,915	+				+1.1
3,098,955	+				+1.0
3,098,956	-				+0.3
3,099,240	+		RR42_RS14410	0.39	+1.5
3,099,241	-		RR42_RS14410	0.39	-0.7
3,099,543	+		RR42_RS14410	0.77	+0.5
3,099,543	+		RR42_RS14410	0.77	+0.5
3,099,544	-		RR42_RS14410	0.78	-0.2
3,100,176	-		RR42_RS14415	0.36	+0.7
3,100,206	-		RR42_RS14415	0.39	-0.9
3,100,392	-		RR42_RS14415	0.53	+0.5
3,100,511	+		RR42_RS14415	0.62	-0.0
3,100,511	+		RR42_RS14415	0.62	+1.0
3,100,511	+		RR42_RS14415	0.62	-0.8
3,100,512	-		RR42_RS14415	0.63	+1.4
3,100,518	-		RR42_RS14415	0.63	-0.3
3,100,518	-		RR42_RS14415	0.63	+0.7
3,100,532	+		RR42_RS14415	0.64	-0.1
3,100,532	+		RR42_RS14415	0.64	-0.5
3,100,533	-		RR42_RS14415	0.64	-1.1
3,100,533	-		RR42_RS14415	0.64	+0.2
3,100,545	-		RR42_RS14415	0.65	-0.0
3,100,545	-		RR42_RS14415	0.65	+0.5
3,100,569	-		RR42_RS14415	0.67	+0.5
3,100,607	+		RR42_RS14415	0.70	+3.0
3,100,607	+		RR42_RS14415	0.70	+0.1