Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13515
Experiment: R2A with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,918,133 | - | RR42_RS13515 | 0.61 | -0.3 | |
2,918,160 | - | RR42_RS13515 | 0.65 | -1.4 | |
2,918,259 | - | RR42_RS13515 | 0.79 | +1.3 | |
2,918,301 | - | RR42_RS13515 | 0.85 | -1.3 | |
2,918,301 | - | RR42_RS13515 | 0.85 | -1.2 | |
2,918,301 | - | RR42_RS13515 | 0.85 | -2.4 | |
2,918,301 | - | RR42_RS13515 | 0.85 | -0.3 | |
2,918,301 | - | RR42_RS13515 | 0.85 | -1.0 | |
2,918,301 | - | RR42_RS13515 | 0.85 | -1.9 | |
2,918,301 | - | RR42_RS13515 | 0.85 | -0.0 | |
2,918,427 | - | -0.4 | |||
2,918,427 | - | -1.0 | |||
2,918,459 | - | -1.0 |
Or see this region's nucleotide sequence