Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12460

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,678,028	-		RR42_RS12455	0.81	+0.9
2,678,028	-		RR42_RS12455	0.81	+0.6
2,678,433	-				+0.6
2,678,517	-				+1.0
2,678,626	-				+0.5
2,678,685	+				-0.6
2,678,968	+		RR42_RS12460	0.28	+0.6
2,678,969	-		RR42_RS12460	0.28	+0.3
2,679,039	+		RR42_RS12460	0.35	+1.3
2,679,039	+		RR42_RS12460	0.35	+0.6
2,679,039	+		RR42_RS12460	0.35	+1.5
2,679,040	-		RR42_RS12460	0.35	+0.7
2,679,040	-		RR42_RS12460	0.35	+1.4
2,679,040	-		RR42_RS12460	0.35	-0.5
2,679,040	-		RR42_RS12460	0.35	+0.4
2,679,073	-		RR42_RS12460	0.39	+0.5
2,679,073	-		RR42_RS12460	0.39	+0.1
2,679,073	-		RR42_RS12460	0.39	+1.4
2,679,073	-		RR42_RS12460	0.39	-0.5
2,679,073	-		RR42_RS12460	0.39	+0.5
2,679,139	-		RR42_RS12460	0.46	-2.3
2,679,145	+		RR42_RS12460	0.47	+0.9
2,679,146	-		RR42_RS12460	0.47	-0.3
2,679,645	+				+0.4
2,679,645	+				+0.3
2,679,646	-				+0.5
2,679,646	-				-0.8
2,679,649	+				+0.1
2,679,649	+				+0.6
2,679,650	-				+0.8
2,679,650	-				+0.9
2,679,650	-				-1.7
2,679,650	-				-0.4
2,679,656	-				-0.8
2,679,656	-				+0.4
2,679,779	-				-1.6
2,679,822	-				-0.8
2,679,878	+		RR42_RS12465	0.11	+0.1
2,679,878	+		RR42_RS12465	0.11	-0.7
2,679,879	-		RR42_RS12465	0.11	+1.3
2,679,935	+		RR42_RS12465	0.13	-0.3
2,679,935	+		RR42_RS12465	0.13	+0.5
2,679,935	+		RR42_RS12465	0.13	+0.7
2,679,935	+		RR42_RS12465	0.13	+0.1
2,679,936	-		RR42_RS12465	0.13	-1.3
2,679,984	-		RR42_RS12465	0.16	-1.8
2,679,984	-		RR42_RS12465	0.16	-0.3
2,680,196	+		RR42_RS12465	0.25	+0.5
2,680,196	+		RR42_RS12465	0.25	+0.5
2,680,196	-		RR42_RS12465	0.25	-0.8
2,680,197	-		RR42_RS12465	0.25	-0.3
2,680,197	-		RR42_RS12465	0.25	-2.6
2,680,197	-		RR42_RS12465	0.25	+0.3
2,680,607	+		RR42_RS12465	0.44	+2.3
2,680,607	+		RR42_RS12465	0.44	+0.3