Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12445

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,673,821	-		RR42_RS12440	0.55	+0.1
2,674,024	+		RR42_RS12440	0.78	+0.2
2,674,024	+		RR42_RS12440	0.78	+1.9
2,674,025	-		RR42_RS12440	0.78	+0.4
2,674,164	+				+0.3
2,674,164	+				+0.3
2,674,164	+				+0.9
2,674,165	-				+0.8
2,674,271	+				-0.9
2,674,271	+				+3.9
2,674,272	-				-0.4
2,674,272	-				-0.7
2,674,309	+				-0.4
2,674,310	-				-0.8
2,674,310	-				+0.5
2,674,439	+				-0.3
2,674,453	+				-1.7
2,674,454	-				+0.3
2,674,557	-				-1.4
2,674,689	-				+0.5
2,674,689	-				+0.2
2,674,739	-				-0.5
2,675,210	-				+1.3
2,675,310	+				+1.1
2,675,310	+				+0.9
2,675,311	-				+1.1
2,675,321	+				+0.2
2,675,321	+				-1.1
2,675,322	-				+1.3
2,675,366	+				+1.2
2,675,492	+		RR42_RS12450	0.39	-0.2
2,675,537	+		RR42_RS12450	0.51	-0.4
2,675,558	+		RR42_RS12450	0.57	-0.1
2,675,576	+		RR42_RS12450	0.62	+0.7
2,675,642	+		RR42_RS12450	0.80	-0.4
2,675,681	+				-0.6
2,675,682	-				-0.4
2,675,682	-				-0.4
2,675,682	-				-1.0
2,675,682	-				-0.3
2,675,687	+				+0.3
2,675,687	+				-0.1
2,675,687	+				-1.5
2,675,688	-				+0.4
2,675,688	-				+2.3
2,675,699	+				+0.7
2,675,836	-				+0.5
2,675,846	-				+0.1
2,675,846	-				+1.3
2,675,951	+				+0.4
2,675,952	-				+1.5
2,675,952	-				+0.0
2,675,952	-				+0.2
2,675,967	-				-0.7
2,676,086	+				-0.5
2,676,198	+		RR42_RS12455	0.11	+1.1