Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12010

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,573,365	+		RR42_RS12005	0.40	+0.1
2,573,365	+		RR42_RS12005	0.40	-0.3
2,573,365	+		RR42_RS12005	0.40	+1.0
2,573,366	-		RR42_RS12005	0.40	-2.1
2,573,366	-		RR42_RS12005	0.40	-1.7
2,573,366	-		RR42_RS12005	0.40	-2.1
2,573,371	+		RR42_RS12005	0.40	-0.4
2,573,372	-		RR42_RS12005	0.41	+0.3
2,573,486	+		RR42_RS12005	0.52	+0.4
2,573,487	-		RR42_RS12005	0.53	+2.8
2,573,878	+				+1.6
2,573,879	-				-2.3
2,573,987	+				+0.0
2,573,988	-				+0.1
2,573,988	-				+0.1
2,574,073	-				+0.1
2,574,076	+				+0.5
2,574,142	+				-1.1
2,574,142	+				+0.7
2,574,143	-				-0.3
2,574,197	+				+1.3
2,574,198	-				+0.0
2,574,208	+				+0.4
2,574,208	+				+0.0
2,574,208	+				-0.5
2,574,208	+				-0.0
2,574,208	+				-0.2
2,574,208	-				-0.2
2,574,209	-				+0.3
2,574,209	-				-0.3
2,574,246	+				-0.9
2,574,258	+				-0.5
2,574,259	-				-1.5
2,574,328	+				-0.3
2,574,329	-				+0.2
2,574,329	-				-0.2
2,574,329	-				+0.8
2,574,329	-				+1.6
2,574,329	-				-0.7
2,574,503	+		RR42_RS12010	0.10	-1.1
2,574,504	-		RR42_RS12010	0.10	-0.6
2,574,535	+		RR42_RS12010	0.12	+0.0
2,574,999	+		RR42_RS12010	0.36	-0.4
2,574,999	+		RR42_RS12010	0.36	-0.3
2,575,000	-		RR42_RS12010	0.36	+0.1
2,575,075	+		RR42_RS12010	0.39	+0.5
2,575,076	-		RR42_RS12010	0.40	-0.7
2,575,465	-		RR42_RS12010	0.60	-0.2
2,576,124	+				+0.8
2,576,124	+				+0.3
2,576,124	+				-0.3
2,576,125	-				-1.7
2,576,125	-				-0.3
2,576,331	+				-1.7
2,576,332	-				+2.3
2,576,460	+		RR42_RS12015	0.28	-0.1
2,576,460	+		RR42_RS12015	0.28	-2.9
2,576,461	-		RR42_RS12015	0.28	-2.1
2,576,818	-				-1.5
2,576,856	-				+0.9
2,576,856	-				+0.8
2,576,867	+				-1.9
2,576,867	+				-0.3
2,576,867	+				-0.4
2,576,868	-				+0.9
2,576,868	-				-0.1
2,577,158	+		RR42_RS12020	0.42	-0.1
2,577,158	+		RR42_RS12020	0.42	+1.0
2,577,158	+		RR42_RS12020	0.42	+1.0