Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11185

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,387,668	+		RR42_RS11175	0.61	-0.8
2,387,668	+		RR42_RS11175	0.61	-0.5
2,387,668	+		RR42_RS11175	0.61	-1.2
2,387,668	+		RR42_RS11175	0.61	-0.1
2,387,669	-		RR42_RS11175	0.61	+0.4
2,388,101	+		RR42_RS11180	0.38	-3.7
2,388,101	+		RR42_RS11180	0.38	-0.8
2,388,102	-		RR42_RS11180	0.39	+0.2
2,388,147	-		RR42_RS11180	0.44	-2.1
2,388,186	-		RR42_RS11180	0.49	-1.1
2,388,347	+		RR42_RS11180	0.69	-3.9
2,388,347	+		RR42_RS11180	0.69	+2.2
2,388,347	+		RR42_RS11180	0.69	-1.1
2,388,587	+				-0.7
2,388,587	+				-0.9
2,388,588	-				+0.4
2,388,588	-				-0.2
2,388,689	+				-0.9
2,388,847	+		RR42_RS11185	0.30	-0.3
2,388,884	+		RR42_RS11185	0.36	-1.4
2,388,885	-		RR42_RS11185	0.36	+1.3
2,388,885	-		RR42_RS11185	0.36	-0.0
2,388,914	+		RR42_RS11185	0.40	-0.4
2,388,915	-		RR42_RS11185	0.41	+1.1
2,388,915	-		RR42_RS11185	0.41	+0.5
2,388,933	-		RR42_RS11185	0.43	+1.3
2,388,973	+		RR42_RS11185	0.50	-0.3
2,388,973	+		RR42_RS11185	0.50	+1.5
2,388,974	-		RR42_RS11185	0.50	-0.3
2,389,084	+		RR42_RS11185	0.67	+0.5
2,389,115	+		RR42_RS11185	0.71	+0.2
2,389,115	+		RR42_RS11185	0.71	-0.8
2,389,116	-		RR42_RS11185	0.72	+0.3
2,389,121	+		RR42_RS11185	0.72	+1.5
2,389,122	-		RR42_RS11185	0.73	-0.9
2,389,122	-		RR42_RS11185	0.73	-0.7
2,389,182	-		RR42_RS11185	0.82	+0.2
2,389,336	+				+1.5
2,389,337	-				-0.2
2,389,474	+				-0.6
2,389,474	+				-1.1
2,389,475	-				+0.3
2,389,475	-				+0.5
2,389,475	-				-1.0
2,389,483	+				+0.5
2,389,483	+				-0.6
2,389,484	-				+0.8
2,389,769	-		RR42_RS11190	0.20	+0.4
2,389,783	+		RR42_RS11190	0.21	-0.3
2,389,783	+		RR42_RS11190	0.21	+0.4
2,389,784	-		RR42_RS11190	0.21	-0.8
2,389,784	-		RR42_RS11190	0.21	-0.0
2,389,784	-		RR42_RS11190	0.21	-1.0
2,389,784	-		RR42_RS11190	0.21	-0.6
2,389,785	+		RR42_RS11190	0.21	-0.6
2,389,785	+		RR42_RS11190	0.21	-0.5
2,389,785	+		RR42_RS11190	0.21	-1.0
2,389,785	+		RR42_RS11190	0.21	+0.2
2,389,785	+		RR42_RS11190	0.21	+1.7
2,389,785	+		RR42_RS11190	0.21	-1.5
2,389,785	+		RR42_RS11190	0.21	-0.8
2,389,786	-		RR42_RS11190	0.21	-0.1
2,389,786	-		RR42_RS11190	0.21	-0.8
2,389,786	-		RR42_RS11190	0.21	+0.5
2,389,827	+		RR42_RS11190	0.24	+0.3
2,389,828	-		RR42_RS11190	0.24	-0.3
2,389,828	-		RR42_RS11190	0.24	+0.7
2,389,909	+		RR42_RS11190	0.29	-0.5
2,389,910	-		RR42_RS11190	0.29	+0.2
2,390,051	-		RR42_RS11190	0.37	-0.3
2,390,210	+		RR42_RS11190	0.47	+1.2
2,390,211	-		RR42_RS11190	0.47	+0.1
2,390,211	-		RR42_RS11190	0.47	-0.9