Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11135

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,377,216	+				-0.1
2,377,217	-				-0.4
2,377,294	+				-0.3
2,377,295	-				-0.5
2,377,472	-		RR42_RS11130	0.25	-1.1
2,377,611	-		RR42_RS11130	0.45	-0.0
2,377,645	+		RR42_RS11130	0.49	-0.7
2,377,646	-		RR42_RS11130	0.49	-0.4
2,377,646	-		RR42_RS11130	0.49	-0.5
2,377,646	-		RR42_RS11130	0.49	+0.1
2,377,646	-		RR42_RS11130	0.49	-0.7
2,377,646	-		RR42_RS11130	0.49	-0.0
2,377,646	-		RR42_RS11130	0.49	-1.3
2,377,646	-		RR42_RS11130	0.49	-0.7
2,377,740	-		RR42_RS11130	0.63	-0.8
2,377,740	-		RR42_RS11130	0.63	+0.7
2,377,759	+		RR42_RS11130	0.65	+0.8
2,377,925	+		RR42_RS11130	0.89	+0.6
2,377,950	-				-2.1
2,377,967	-				-0.3
2,378,052	+				+0.5
2,378,331	+		RR42_RS11135	0.42	-0.7
2,378,332	-		RR42_RS11135	0.42	+0.6
2,378,356	+		RR42_RS11135	0.45	+0.5
2,378,357	-		RR42_RS11135	0.45	-0.1
2,378,445	+		RR42_RS11135	0.57	-0.8
2,378,446	-		RR42_RS11135	0.57	+0.5
2,378,512	+		RR42_RS11135	0.65	-0.8
2,378,512	+		RR42_RS11135	0.65	-0.8
2,378,513	-		RR42_RS11135	0.66	+0.0
2,378,654	-		RR42_RS11135	0.84	+0.0
2,378,654	-		RR42_RS11135	0.84	-0.5
2,378,750	+				-0.8
2,378,751	-				-0.5
2,378,751	-				-1.2
2,378,807	-				-0.6
2,378,972	+		RR42_RS11140	0.15	-0.8
2,379,038	+		RR42_RS11140	0.20	-1.3
2,379,155	+		RR42_RS11140	0.29	+0.3
2,379,482	+		RR42_RS11140	0.54	+0.3
2,379,482	+		RR42_RS11140	0.54	+1.0
2,379,482	+		RR42_RS11140	0.54	-0.9
2,379,482	+		RR42_RS11140	0.54	+0.9
2,379,483	-		RR42_RS11140	0.54	-0.3
2,379,483	-		RR42_RS11140	0.54	-0.2
2,379,483	-		RR42_RS11140	0.54	-1.3
2,379,524	+		RR42_RS11140	0.57	-0.5
2,379,527	+		RR42_RS11140	0.57	-0.7
2,379,528	-		RR42_RS11140	0.57	-0.5
2,379,594	+		RR42_RS11140	0.62	-0.9
2,379,708	-		RR42_RS11140	0.71	+0.1