Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10355

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,217,659	+		RR42_RS10350	0.76	-0.2
2,218,472	-				-0.8
2,218,610	+				+0.3
2,218,611	-				+1.1
2,218,810	-		RR42_RS10355	0.33	+1.2
2,218,947	+		RR42_RS10355	0.62	-0.2
2,218,971	+		RR42_RS10355	0.67	-0.8
2,218,971	+		RR42_RS10355	0.67	+0.8
2,218,971	+		RR42_RS10355	0.67	+0.6
2,219,091	+				-2.9
2,219,190	+				+0.0
2,219,250	+				+0.5
2,219,311	-				-1.1
2,219,316	+				-0.0
2,219,319	+				+0.6
2,219,319	+				-1.1
2,219,373	+		RR42_RS10360	0.14	+0.9
2,219,374	-		RR42_RS10360	0.14	-0.5
2,219,374	-		RR42_RS10360	0.14	-0.4
2,219,375	+		RR42_RS10360	0.14	+0.1
2,219,376	-		RR42_RS10360	0.14	-0.3
2,219,376	-		RR42_RS10360	0.14	-1.4
2,219,376	-		RR42_RS10360	0.14	+1.2
2,219,377	+		RR42_RS10360	0.14	+0.6
2,219,377	+		RR42_RS10360	0.14	+0.5
2,219,377	+		RR42_RS10360	0.14	-0.4
2,219,378	-		RR42_RS10360	0.14	-0.2
2,219,378	-		RR42_RS10360	0.14	-0.8
2,219,378	-		RR42_RS10360	0.14	+0.5
2,219,386	-		RR42_RS10360	0.15	-1.4
2,219,504	+		RR42_RS10360	0.27	-0.9
2,219,519	+		RR42_RS10360	0.29	+0.2
2,219,522	+		RR42_RS10360	0.29	+0.3
2,219,522	+		RR42_RS10360	0.29	+2.6
2,219,554	-		RR42_RS10360	0.32	-0.8
2,219,600	+		RR42_RS10360	0.37	+0.2
2,219,601	-		RR42_RS10360	0.37	-0.6
2,219,601	-		RR42_RS10360	0.37	-2.8
2,219,601	-		RR42_RS10360	0.37	+0.2
2,219,601	-		RR42_RS10360	0.37	+1.7
2,219,601	-		RR42_RS10360	0.37	+2.0
2,219,637	+		RR42_RS10360	0.41	+0.5
2,219,684	-		RR42_RS10360	0.46	-0.8
2,219,769	-		RR42_RS10360	0.55	+0.4
2,219,769	-		RR42_RS10360	0.55	+0.2
2,219,813	+		RR42_RS10360	0.59	+0.2
2,219,813	+		RR42_RS10360	0.59	-0.7
2,219,814	-		RR42_RS10360	0.59	-0.1
2,219,819	-		RR42_RS10360	0.60	+0.6
2,219,840	+		RR42_RS10360	0.62	+0.4