Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10225

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,187,011	+		RR42_RS10215	0.78	-0.7
2,187,052	+		RR42_RS10215	0.82	-1.2
2,187,052	+		RR42_RS10215	0.82	-0.5
2,187,101	+		RR42_RS10215	0.86	-0.2
2,187,101	+		RR42_RS10215	0.86	-1.8
2,187,102	-		RR42_RS10215	0.86	-0.3
2,187,105	-		RR42_RS10215	0.86	+0.5
2,187,259	+				+0.5
2,187,259	+				-0.4
2,187,259	+				-1.2
2,187,265	-				-1.1
2,187,614	+		RR42_RS10220	0.39	+1.0
2,187,615	-		RR42_RS10220	0.39	-0.5
2,187,615	-		RR42_RS10220	0.39	+0.7
2,187,615	-		RR42_RS10220	0.39	+1.4
2,187,618	+		RR42_RS10220	0.40	-1.4
2,187,743	+		RR42_RS10220	0.66	+0.2
2,187,745	+		RR42_RS10220	0.66	+0.1
2,187,764	-		RR42_RS10220	0.70	+1.5
2,187,884	+				+0.4
2,187,885	-				-2.2
2,187,885	-				-0.4
2,188,134	+		RR42_RS10225	0.21	+0.9
2,188,134	+		RR42_RS10225	0.21	-0.3
2,188,167	+		RR42_RS10225	0.24	+0.6
2,188,167	+		RR42_RS10225	0.24	+0.3
2,188,404	+		RR42_RS10225	0.49	-0.3
2,188,404	+		RR42_RS10225	0.49	-0.0
2,188,663	+		RR42_RS10225	0.75	-0.1
2,188,843	+				+0.4
2,188,843	+				+1.2
2,188,844	-				-0.4
2,188,927	-				-0.1
2,189,114	+				-1.8
2,189,115	-				+0.5
2,189,194	+		RR42_RS10230	0.14	-0.1
2,189,414	-		RR42_RS10230	0.26	+0.8
2,189,470	+		RR42_RS10230	0.29	-0.4
2,189,471	-		RR42_RS10230	0.29	-0.0
2,189,586	+		RR42_RS10230	0.35	-0.7
2,189,754	+		RR42_RS10230	0.45	-1.1
2,189,770	+		RR42_RS10230	0.46	-0.9
2,189,771	-		RR42_RS10230	0.46	-1.5
2,189,788	+		RR42_RS10230	0.47	-0.2