Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09170

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,937,002	+				-1.0
1,937,002	+				+0.7
1,937,014	+				+0.3
1,937,065	+				-1.3
1,937,066	-				+0.0
1,937,066	-				-0.6
1,937,066	-				-0.1
1,937,070	+				-0.1
1,937,143	+				-0.2
1,937,144	-				+0.4
1,937,144	-				-1.0
1,937,144	-				-0.6
1,937,312	+		RR42_RS09165	0.20	+0.5
1,937,312	+		RR42_RS09165	0.20	-0.2
1,937,313	-		RR42_RS09165	0.20	-2.0
1,937,313	-		RR42_RS09165	0.20	+0.4
1,937,313	-		RR42_RS09165	0.20	-1.0
1,937,313	-		RR42_RS09165	0.20	-1.4
1,937,468	+		RR42_RS09165	0.43	-0.5
1,937,810	-				+0.3
1,937,831	-				+0.2
1,937,831	-				+0.7
1,937,939	-				-2.2
1,938,034	+		RR42_RS09170	0.13	+0.6
1,938,035	-		RR42_RS09170	0.13	-1.1
1,938,542	+		RR42_RS09170	0.49	-2.2
1,938,542	+		RR42_RS09170	0.49	+0.1
1,938,543	-		RR42_RS09170	0.49	+1.2
1,938,587	-		RR42_RS09170	0.52	-0.3
1,938,701	-		RR42_RS09170	0.60	-2.2
1,938,701	-		RR42_RS09170	0.60	+0.6
1,939,334	+				-0.8
1,939,335	-				+1.2
1,939,335	-				+0.2
1,939,345	+				+0.6
1,939,454	+				-0.1
1,939,455	-		RR42_RS09175	0.10	-1.3
1,939,657	+		RR42_RS09175	0.27	+1.1
1,939,657	+		RR42_RS09175	0.27	-0.2
1,939,935	-		RR42_RS09175	0.50	-0.4
1,939,985	+		RR42_RS09175	0.54	-0.0
1,940,168	+		RR42_RS09175	0.69	+0.7
1,940,169	-		RR42_RS09175	0.69	-0.0
1,940,169	-		RR42_RS09175	0.69	-0.4