Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08820

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,846,439	-		RR42_RS08815	0.36	+0.2
1,846,606	+		RR42_RS08815	0.47	-0.3
1,846,606	+		RR42_RS08815	0.47	+0.1
1,846,607	-		RR42_RS08815	0.47	-1.6
1,846,730	-		RR42_RS08815	0.55	+1.2
1,846,732	+		RR42_RS08815	0.55	+0.2
1,846,732	+		RR42_RS08815	0.55	-1.1
1,846,732	+		RR42_RS08815	0.55	-2.9
1,846,732	+		RR42_RS08815	0.55	-1.1
1,846,733	-		RR42_RS08815	0.55	-0.2
1,846,745	-		RR42_RS08815	0.56	-0.8
1,846,745	-		RR42_RS08815	0.56	+0.1
1,846,825	+		RR42_RS08815	0.61	+0.9
1,846,826	-		RR42_RS08815	0.61	-0.1
1,846,924	+		RR42_RS08815	0.68	+0.8
1,846,924	+		RR42_RS08815	0.68	-0.2
1,847,104	+		RR42_RS08815	0.79	+1.6
1,847,110	+		RR42_RS08815	0.80	-1.0
1,847,125	+		RR42_RS08815	0.81	+0.4
1,847,125	+		RR42_RS08815	0.81	+0.8
1,847,126	-		RR42_RS08815	0.81	-0.6
1,847,126	-		RR42_RS08815	0.81	-0.6
1,847,128	+		RR42_RS08815	0.81	-1.7
1,847,129	-		RR42_RS08815	0.81	+0.0
1,847,129	-		RR42_RS08815	0.81	+0.4
1,847,226	+		RR42_RS08815	0.87	+0.1
1,847,354	+				-0.9
1,847,541	+				+1.4
1,847,541	+				+0.9
1,847,541	+				-0.6
1,847,542	-				-1.8
1,847,617	+				-0.8
1,847,618	-				-0.8
1,847,685	+				+0.6
1,847,868	+		RR42_RS08820	0.12	+2.2
1,847,988	+		RR42_RS08820	0.15	+0.0
1,848,091	+		RR42_RS08820	0.18	-0.6
1,848,092	-		RR42_RS08820	0.18	-1.5
1,848,486	+		RR42_RS08820	0.28	-1.6
1,848,487	-		RR42_RS08820	0.28	+0.0
1,848,696	+		RR42_RS08820	0.34	-1.7
1,848,831	+		RR42_RS08820	0.38	-1.8
1,848,832	-		RR42_RS08820	0.38	-0.5
1,848,972	+		RR42_RS08820	0.41	-1.9
1,848,972	+		RR42_RS08820	0.41	-0.3
1,848,985	-		RR42_RS08820	0.42	-0.2
1,849,114	+		RR42_RS08820	0.45	+2.6
1,849,330	-		RR42_RS08820	0.51	-0.3
1,849,434	+		RR42_RS08820	0.54	+0.1
1,849,504	-		RR42_RS08820	0.56	-0.9
1,849,723	-		RR42_RS08820	0.61	-0.8
1,849,744	-		RR42_RS08820	0.62	-0.6
1,849,840	-		RR42_RS08820	0.65	-1.4
1,849,946	+		RR42_RS08820	0.67	-1.9
1,849,946	+		RR42_RS08820	0.67	-0.4
1,849,947	-		RR42_RS08820	0.67	+0.7
1,849,947	-		RR42_RS08820	0.67	-2.6
1,850,166	+		RR42_RS08820	0.73	-0.2
1,850,178	+		RR42_RS08820	0.74	+0.6
1,850,288	-		RR42_RS08820	0.77	-0.5
1,850,364	+		RR42_RS08820	0.79	+0.1
1,850,421	+		RR42_RS08820	0.80	-1.0
1,850,434	-		RR42_RS08820	0.80	-2.3
1,850,506	-		RR42_RS08820	0.82	-1.0
1,850,514	+		RR42_RS08820	0.83	+1.5
1,850,514	+		RR42_RS08820	0.83	+0.2
1,850,515	-		RR42_RS08820	0.83	-0.2
1,850,568	+		RR42_RS08820	0.84	+0.4
1,850,722	-		RR42_RS08820	0.88	+0.6
1,850,854	-				-0.6
1,850,860	-				+0.0
1,850,860	-				+1.1
1,851,001	+				-0.5
1,851,308	-				-0.7
1,851,321	+				+0.5
1,851,322	-				+2.5
1,851,374	-				-0.3
1,851,403	+				-1.1
1,851,403	+				+0.8
1,851,404	-				+1.2
1,851,404	-				+1.7
1,851,404	-				-0.8
1,851,493	+		RR42_RS08825	0.11	-0.1
1,851,865	+		RR42_RS08825	0.38	-0.5
1,851,955	+		RR42_RS08825	0.44	+0.2
1,851,956	-		RR42_RS08825	0.45	-0.4
1,851,956	-		RR42_RS08825	0.45	-0.2
1,851,956	-		RR42_RS08825	0.45	+0.2
1,851,956	-		RR42_RS08825	0.45	-1.8
1,852,092	-		RR42_RS08825	0.54	-0.5