Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07500

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,600,192	-		RR42_RS07490	0.66	-0.1
1,600,219	+		RR42_RS07490	0.70	-0.7
1,600,219	+		RR42_RS07490	0.70	-2.1
1,600,233	+		RR42_RS07490	0.73	-1.2
1,600,233	+		RR42_RS07490	0.73	-0.9
1,600,233	+		RR42_RS07490	0.73	-1.6
1,600,233	+		RR42_RS07490	0.73	+0.8
1,600,234	-		RR42_RS07490	0.73	-0.1
1,600,234	-		RR42_RS07490	0.73	+2.3
1,600,234	-		RR42_RS07490	0.73	-1.0
1,600,291	-				+1.3
1,600,315	-		RR42_RS07490	0.85	-1.1
1,600,315	-		RR42_RS07490	0.85	-2.1
1,600,315	-		RR42_RS07490	0.85	-3.3
1,600,418	+				-1.7
1,600,502	-				-2.2
1,600,516	-		RR42_RS07495	0.11	-0.0
1,600,516	-		RR42_RS07495	0.11	-0.5
1,600,690	+		RR42_RS07495	0.56	-0.0
1,600,691	-		RR42_RS07495	0.56	-0.6
1,600,691	-		RR42_RS07495	0.56	-0.5
1,600,892	-				-0.3
1,600,892	-				-1.4
1,600,894	-				+0.1
1,600,894	-				-1.1
1,600,934	+				-2.6
1,600,985	+				-0.5
1,600,987	+				-0.3
1,600,988	-				-0.1
1,600,988	-				+0.3
1,600,988	-				-0.5
1,601,060	-				+0.5
1,601,079	+				+1.0
1,601,079	+				-0.2
1,601,079	+				-0.3
1,601,080	-				-1.7
1,601,080	-				+0.2
1,601,080	-				+0.3
1,601,089	+				+1.3
1,601,089	+				-0.0
1,601,090	-				-1.1
1,601,211	+		RR42_RS07500	0.11	-0.8
1,601,211	+		RR42_RS07500	0.11	+1.2
1,601,211	+				+2.8
1,601,211	+		RR42_RS07500	0.11	-1.3
1,601,211	+		RR42_RS07500	0.11	-0.1
1,601,211	+		RR42_RS07500	0.11	-0.6
1,601,211	+		RR42_RS07500	0.11	-0.6
1,601,212	-		RR42_RS07500	0.11	-1.3
1,601,212	-		RR42_RS07500	0.11	-0.6
1,601,212	-		RR42_RS07500	0.11	+0.8
1,601,212	-		RR42_RS07500	0.11	-0.3
1,601,212	-		RR42_RS07500	0.11	-0.1
1,601,212	-		RR42_RS07500	0.11	+0.1
1,601,279	+		RR42_RS07500	0.17	-0.1
1,601,279	+		RR42_RS07500	0.17	+0.5
1,601,279	+		RR42_RS07500	0.17	+0.4
1,601,279	+		RR42_RS07500	0.17	+0.4
1,601,280	-		RR42_RS07500	0.17	-0.4
1,601,280	-		RR42_RS07500	0.17	-1.2
1,601,280	-		RR42_RS07500	0.17	-1.8
1,601,368	-		RR42_RS07500	0.24	-0.5
1,601,368	-		RR42_RS07500	0.24	-1.1
1,601,667	+		RR42_RS07500	0.48	+0.2
1,601,719	-		RR42_RS07500	0.52	-1.2
1,601,719	-		RR42_RS07500	0.52	-1.0
1,601,735	-		RR42_RS07500	0.53	+0.1
1,601,856	+		RR42_RS07500	0.63	+0.1
1,601,857	-		RR42_RS07500	0.63	+0.7
1,601,911	-		RR42_RS07500	0.68	+0.3
1,601,947	+		RR42_RS07500	0.71	-0.6
1,601,948	-		RR42_RS07500	0.71	-0.8
1,602,008	-		RR42_RS07500	0.75	+0.7
1,602,071	+		RR42_RS07500	0.81	-1.8
1,602,071	+		RR42_RS07500	0.81	+3.8
1,602,071	+		RR42_RS07500	0.81	-0.6
1,602,093	+		RR42_RS07500	0.82	+0.4
1,602,195	+				-0.8
1,602,195	+				-1.1
1,602,195	+				+0.7
1,602,195	+				-0.0
1,602,195	+				-0.5
1,602,196	-				-0.4
1,602,411	+				+0.5
1,602,412	-				+0.8
1,602,472	-				+2.6
1,602,727	-		RR42_RS07505	0.23	+0.2
1,602,813	+		RR42_RS07505	0.29	+0.5
1,602,814	-		RR42_RS07505	0.29	+0.5
1,602,885	+		RR42_RS07505	0.34	-2.3
1,602,886	-		RR42_RS07505	0.34	+0.0
1,602,957	+		RR42_RS07505	0.39	-0.1
1,602,957	+		RR42_RS07505	0.39	-0.6
1,602,958	-		RR42_RS07505	0.40	-0.7
1,602,971	-		RR42_RS07505	0.40	+0.1
1,603,046	-		RR42_RS07505	0.46	+0.3