Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07410

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,583,620	+		RR42_RS07405	0.24	-0.8
1,583,620	+		RR42_RS07405	0.24	+0.2
1,583,620	+		RR42_RS07405	0.24	+1.5
1,583,620	+		RR42_RS07405	0.24	+0.0
1,583,620	+		RR42_RS07405	0.24	-0.1
1,583,621	-		RR42_RS07405	0.24	-1.6
1,583,621	-		RR42_RS07405	0.24	+0.5
1,583,621	-		RR42_RS07405	0.24	+0.4
1,583,702	-		RR42_RS07405	0.36	-0.8
1,583,714	-		RR42_RS07405	0.37	-0.6
1,583,720	-		RR42_RS07405	0.38	+0.5
1,583,720	-		RR42_RS07405	0.38	-0.0
1,583,722	+		RR42_RS07405	0.38	-0.7
1,583,722	+		RR42_RS07405	0.38	+0.2
1,583,768	+		RR42_RS07405	0.45	-0.3
1,583,783	-		RR42_RS07405	0.47	+1.0
1,583,920	+		RR42_RS07405	0.67	-0.2
1,583,973	+		RR42_RS07405	0.74	-0.7
1,583,974	-		RR42_RS07405	0.74	+1.6
1,583,974	-		RR42_RS07405	0.74	-0.6
1,584,093	-				+0.3
1,584,099	+				+0.0
1,584,100	-				-0.9
1,584,100	-				-0.7
1,584,106	-				+1.5
1,584,106	-				+0.6
1,584,106	-				-0.7
1,584,106	-				-0.2
1,584,106	-				+0.2
1,584,146	+				+1.3
1,584,146	+				+0.6
1,584,151	+				+0.1
1,584,152	-				-1.9
1,584,152	-				-1.6
1,584,258	-				-1.1
1,584,258	-				-0.9
1,584,258	-				-0.3
1,584,278	+				+1.1
1,584,318	-				+0.9
1,584,346	+				-1.1
1,584,367	+				+1.3
1,584,396	-				-0.3
1,584,411	+				-0.6
1,584,455	-				-1.3
1,584,477	-				+0.3
1,584,477	-				-3.0
1,584,477	-				-1.2
1,584,477	-				-1.5
1,584,485	+				+0.0
1,584,485	+				-3.4
1,584,486	-				-1.4
1,584,572	+				-0.9
1,584,636	-				-0.9
1,585,240	+		RR42_RS07410	0.62	-1.0
1,585,240	+		RR42_RS07410	0.62	-1.0
1,585,336	+		RR42_RS07410	0.71	-0.7
1,585,336	+		RR42_RS07410	0.71	-1.8
1,585,356	+		RR42_RS07410	0.73	-0.7
1,585,356	+		RR42_RS07410	0.73	-0.2
1,585,357	-		RR42_RS07410	0.73	+0.1
1,585,421	+		RR42_RS07410	0.78	-1.2
1,585,421	+		RR42_RS07410	0.78	+0.7
1,585,421	+		RR42_RS07410	0.78	-1.0
1,585,422	-		RR42_RS07410	0.78	-0.9
1,585,422	-		RR42_RS07410	0.78	-1.2
1,585,422	-		RR42_RS07410	0.78	-2.1
1,585,422	-		RR42_RS07410	0.78	+0.3
1,585,462	+		RR42_RS07410	0.82	-0.7
1,585,463	-		RR42_RS07410	0.82	-2.1
1,586,007	+		RR42_RS07415	0.17	+0.3
1,586,007	+		RR42_RS07415	0.17	+2.6
1,586,007	+		RR42_RS07415	0.17	-0.2
1,586,007	+		RR42_RS07415	0.17	+0.1
1,586,008	-		RR42_RS07415	0.17	-0.2
1,586,008	-		RR42_RS07415	0.17	+0.5
1,586,008	-		RR42_RS07415	0.17	+0.4
1,586,008	-		RR42_RS07415	0.17	+0.9
1,586,008	-		RR42_RS07415	0.17	-0.7
1,586,042	-		RR42_RS07415	0.20	-0.9
1,586,042	-		RR42_RS07415	0.20	+0.4
1,586,042	-		RR42_RS07415	0.20	-0.2
1,586,331	+		RR42_RS07415	0.40	+0.7
1,586,331	+		RR42_RS07415	0.40	+0.0
1,586,332	-		RR42_RS07415	0.40	-0.3
1,586,332	-		RR42_RS07415	0.40	-1.9
1,586,332	-		RR42_RS07415	0.40	+0.4
1,586,505	-		RR42_RS07415	0.53	-0.7
1,586,505	-		RR42_RS07415	0.53	-0.1
1,586,551	+		RR42_RS07415	0.56	-0.4