Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07285

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,553,051	+				+0.0
1,553,051	+				-0.1
1,553,052	-				-1.2
1,553,052	-				-1.5
1,553,113	-				-1.3
1,553,137	+				-2.9
1,553,137	+				-0.7
1,553,137	+				+0.2
1,553,138	-				+0.9
1,553,138	-				-1.2
1,553,138	-				-0.5
1,553,343	-				+0.7
1,553,344	+				+0.1
1,553,344	+				+1.5
1,553,345	-				-0.2
1,553,345	-				-0.9
1,553,381	-		RR42_RS07280	0.17	-2.1
1,553,416	+		RR42_RS07280	0.26	+1.3
1,553,452	+		RR42_RS07280	0.35	-1.2
1,553,524	+		RR42_RS07280	0.54	-0.3
1,553,580	-		RR42_RS07280	0.69	-0.5
1,553,580	-		RR42_RS07280	0.69	-0.3
1,553,614	+		RR42_RS07280	0.78	-1.2
1,553,614	+		RR42_RS07280	0.78	-1.6
1,553,614	+		RR42_RS07280	0.78	-1.7
1,553,615	-		RR42_RS07280	0.78	-0.4
1,553,615	-		RR42_RS07280	0.78	+0.1
1,553,716	-				-0.6
1,553,716	-				-0.3
1,553,794	-				-1.7
1,553,821	-				-1.4
1,553,838	+				+0.6
1,553,838	+				-0.5
1,553,838	+				+1.0
1,553,838	+				-0.0
1,553,839	-				-0.9
1,553,851	-				-1.1
1,553,910	+				+0.6
1,553,910	+				-0.5
1,553,910	+				-0.5
1,553,910	+				+0.0
1,553,910	+				-0.2
1,553,910	+				-1.1
1,553,911	-				-0.4
1,553,995	-				-0.4
1,553,995	-				-0.6
1,554,025	+				+0.6
1,554,025	+				+0.7
1,554,026	-				-2.9
1,554,026	-				+0.9
1,554,087	+				-0.9
1,554,088	-				+0.3
1,554,523	-		RR42_RS07285	0.52	-0.5
1,554,523	-		RR42_RS07285	0.52	-2.1
1,554,523	-		RR42_RS07285	0.52	-0.4
1,554,523	-		RR42_RS07285	0.52	-1.0
1,554,523	-		RR42_RS07285	0.52	+1.6
1,554,523	-		RR42_RS07285	0.52	+1.6
1,554,528	+				+1.3
1,554,528	+		RR42_RS07285	0.53	+0.7
1,554,528	+		RR42_RS07285	0.53	+0.5
1,554,528	+		RR42_RS07285	0.53	-0.6
1,554,528	+		RR42_RS07285	0.53	+1.0
1,554,529	-		RR42_RS07285	0.53	-0.2
1,554,631	+		RR42_RS07285	0.63	-1.3
1,554,631	+		RR42_RS07285	0.63	+0.5
1,554,727	-		RR42_RS07285	0.73	+1.3
1,554,909	+				+0.9
1,554,909	+				+0.5
1,554,910	-				-0.6
1,554,944	+				-0.3
1,554,944	+				-1.7
1,554,945	-				-0.1
1,554,977	+				-0.6
1,554,977	+				+0.5
1,554,977	+				+0.4
1,554,978	-				-0.2
1,554,978	-				+0.3
1,554,978	-				-1.2
1,554,978	-				-1.7
1,555,008	+				+0.6
1,555,008	+				+2.8
1,555,009	-				+0.6
1,555,009	-				-0.3
1,555,009	-				-0.7
1,555,009	-				+0.4
1,555,009	-				-1.3
1,555,014	+				-0.5
1,555,015	-				-0.4
1,555,015	-				-0.2
1,555,192	-				-0.6
1,555,192	-				+1.0
1,555,203	+				-0.4
1,555,203	+				-0.8
1,555,204	-				+0.3
1,555,204	-				+2.3
1,555,420	+				-2.8
1,555,420	+				+0.0
1,555,446	-				+0.3
1,555,461	-				+1.5
1,555,461	-				+1.6
1,555,461	-				+0.3
1,555,464	+				-0.3
1,555,465	-				-0.3
1,555,465	-				+0.9
1,555,465	-				+1.0
1,555,509	-				-1.0
1,555,670	+				+0.1
1,555,688	+				+0.1