Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06405

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,403,265	+		RR42_RS06400	0.40	-0.2
1,403,266	-		RR42_RS06400	0.40	+0.6
1,403,411	-		RR42_RS06400	0.49	+0.6
1,403,411	-		RR42_RS06400	0.49	-1.8
1,403,667	+		RR42_RS06400	0.64	+0.1
1,403,667	+		RR42_RS06400	0.64	-1.7
1,403,667	+		RR42_RS06400	0.64	-0.7
1,403,667	+		RR42_RS06400	0.64	+1.0
1,403,668	-		RR42_RS06400	0.64	+0.1
1,403,668	-		RR42_RS06400	0.64	+0.9
1,403,668	-		RR42_RS06400	0.64	+1.3
1,403,710	-		RR42_RS06400	0.67	+0.6
1,403,770	-		RR42_RS06400	0.71	+1.2
1,403,836	-		RR42_RS06400	0.75	-1.5
1,403,934	+		RR42_RS06400	0.81	-0.1
1,403,935	-		RR42_RS06400	0.81	+0.3
1,404,003	+		RR42_RS06400	0.85	-0.2
1,404,003	+		RR42_RS06400	0.85	-0.1
1,404,003	+		RR42_RS06400	0.85	+0.1
1,404,003	+		RR42_RS06400	0.85	-0.5
1,404,004	-		RR42_RS06400	0.85	-1.4
1,404,004	-		RR42_RS06400	0.85	+0.4
1,404,004	-		RR42_RS06400	0.85	-0.6
1,404,004	-		RR42_RS06400	0.85	-1.4
1,404,060	+		RR42_RS06400	0.88	+0.4
1,404,061	-		RR42_RS06400	0.88	+1.3
1,404,314	+		RR42_RS06405	0.18	-1.5
1,404,314	+		RR42_RS06405	0.18	+0.7
1,404,315	-		RR42_RS06405	0.19	-1.2
1,404,440	+		RR42_RS06405	0.53	-0.1
1,404,441	-		RR42_RS06405	0.53	-0.5
1,404,449	+		RR42_RS06405	0.56	-0.7
1,404,502	+		RR42_RS06405	0.70	-1.4
1,404,725	-				+0.5
1,404,762	+				+0.3
1,404,763	-				-0.1
1,404,763	-				-0.1
1,404,826	-		RR42_RS06410	0.14	-0.5
1,404,826	-		RR42_RS06410	0.14	-0.2
1,405,368	+		RR42_RS06410	0.58	-0.2
1,405,369	-		RR42_RS06410	0.58	+1.3
1,405,378	-		RR42_RS06410	0.59	-1.0
1,405,517	+		RR42_RS06410	0.70	-1.0
1,405,517	+		RR42_RS06410	0.70	+0.3
1,405,518	-		RR42_RS06410	0.70	+0.9
1,405,518	-		RR42_RS06410	0.70	-0.0
1,405,537	-		RR42_RS06410	0.72	-0.1
1,405,565	+		RR42_RS06410	0.74	-1.4
1,405,572	+		RR42_RS06410	0.75	+0.6
1,405,572	+		RR42_RS06410	0.75	-0.5
1,405,573	-		RR42_RS06410	0.75	-1.3