Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05795

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,273,729	+		RR42_RS05790	0.34	-3.4
1,273,730	-		RR42_RS05790	0.34	-1.5
1,273,753	+		RR42_RS05790	0.37	-2.1
1,273,936	+		RR42_RS05790	0.60	-2.0
1,273,937	-		RR42_RS05790	0.60	-2.3
1,273,937	-		RR42_RS05790	0.60	-3.2
1,273,937	-		RR42_RS05790	0.60	-1.8
1,274,324	-				+1.0
1,274,350	+				+0.2
1,274,351	-				-1.0
1,274,391	+				-1.8
1,274,400	+				-1.1
1,274,401	-				+0.4
1,274,514	+				-1.7
1,274,514	+				+0.5
1,274,515	-				-0.6
1,274,515	-				+0.0
1,274,515	-				-1.6
1,274,515	-				+0.4
1,274,515	-				-0.1
1,274,718	-		RR42_RS05795	0.12	-1.2
1,274,718	-		RR42_RS05795	0.12	-0.4
1,274,801	+		RR42_RS05795	0.21	+0.0
1,274,801	+		RR42_RS05795	0.21	+1.0
1,274,802	-		RR42_RS05795	0.22	-0.3
1,274,942	+		RR42_RS05795	0.38	+0.4
1,274,942	+		RR42_RS05795	0.38	-0.1
1,274,943	-		RR42_RS05795	0.38	-1.5
1,274,943	-		RR42_RS05795	0.38	-0.6
1,275,038	+		RR42_RS05795	0.49	+0.8
1,275,038	+		RR42_RS05795	0.49	-1.6
1,275,039	-		RR42_RS05795	0.49	-0.4
1,275,050	+		RR42_RS05795	0.50	-0.2
1,275,053	+		RR42_RS05795	0.50	-1.1
1,275,060	+		RR42_RS05795	0.51	+0.6
1,275,061	-		RR42_RS05795	0.51	+0.3
1,275,101	+		RR42_RS05795	0.56	-0.1
1,275,101	+		RR42_RS05795	0.56	+0.9
1,275,243	-		RR42_RS05795	0.72	-0.6
1,275,243	-		RR42_RS05795	0.72	-0.0
1,275,380	+		RR42_RS05795	0.88	-1.0
1,275,393	+		RR42_RS05795	0.89	-1.5
1,275,622	-		RR42_RS05800	0.12	+0.8
1,275,629	-		RR42_RS05800	0.13	-2.0
1,275,921	-		RR42_RS05800	0.43	+0.8
1,275,921	-		RR42_RS05800	0.43	-0.6
1,275,921	-		RR42_RS05800	0.43	-1.3
1,275,921	-		RR42_RS05800	0.43	+0.3
1,276,058	+		RR42_RS05800	0.57	-1.3
1,276,096	-		RR42_RS05800	0.60	+1.0
1,276,096	-		RR42_RS05800	0.60	-2.3
1,276,146	-		RR42_RS05800	0.66	+0.1
1,276,160	+		RR42_RS05800	0.67	-2.2
1,276,211	+		RR42_RS05800	0.72	+0.9
1,276,394	+				-1.2
1,276,394	+				+0.4
1,276,473	+				-1.0
1,276,474	-				-1.4