Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05420

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,196,136	+		RR42_RS05410	0.81	-0.4
1,196,427	+		RR42_RS05415	0.20	+2.0
1,196,428	-		RR42_RS05415	0.20	+0.5
1,196,428	-		RR42_RS05415	0.20	-0.9
1,196,512	+		RR42_RS05415	0.35	-0.0
1,196,626	+		RR42_RS05415	0.55	-1.6
1,196,627	-		RR42_RS05415	0.55	-0.0
1,196,713	+		RR42_RS05415	0.71	-0.7
1,196,713	+		RR42_RS05415	0.71	-0.0
1,196,714	-		RR42_RS05415	0.71	+0.5
1,196,752	-		RR42_RS05415	0.77	-1.0
1,196,995	+				+0.2
1,196,996	-				-1.3
1,196,996	-				+0.4
1,196,996	-				-1.0
1,197,416	+		RR42_RS05420	0.44	-3.3
1,197,417	-		RR42_RS05420	0.44	-2.6
1,197,417	-		RR42_RS05420	0.44	-1.9
1,197,471	-		RR42_RS05420	0.51	-0.9
1,197,857	-				-1.1
1,197,857	-				-1.7
1,197,876	+				-1.9
1,197,876	+				+0.3
1,197,877	-				-3.5
1,197,899	-		RR42_RS05425	0.10	+0.3
1,197,982	+		RR42_RS05425	0.29	-0.7
1,197,982	+		RR42_RS05425	0.29	-1.4
1,197,983	-		RR42_RS05425	0.29	-1.9
1,197,983	-		RR42_RS05425	0.29	-0.7
1,197,983	-		RR42_RS05425	0.29	-2.0
1,197,983	-		RR42_RS05425	0.29	-1.0
1,197,983	-		RR42_RS05425	0.29	-0.4
1,197,983	-		RR42_RS05425	0.29	-1.0
1,197,983	-		RR42_RS05425	0.29	-1.0
1,197,983	-		RR42_RS05425	0.29	-1.9
1,198,406	-		RR42_RS05430	0.21	+1.2
1,198,567	+		RR42_RS05430	0.50	+0.9
1,198,619	-		RR42_RS05430	0.59	+1.3
1,198,626	-		RR42_RS05430	0.60	-0.4
1,198,667	+		RR42_RS05430	0.67	+1.3
1,198,668	-		RR42_RS05430	0.67	-1.3
1,198,832	+				+1.6
1,198,832	+				-0.8