Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05375

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,188,864	-		RR42_RS05370	0.62	-0.5
1,188,959	+		RR42_RS05370	0.66	-0.3
1,188,959	+		RR42_RS05370	0.66	-1.0
1,188,959	+		RR42_RS05370	0.66	-0.1
1,188,960	-		RR42_RS05370	0.66	-0.7
1,188,960	-		RR42_RS05370	0.66	-0.5
1,188,960	-		RR42_RS05370	0.66	+0.8
1,189,041	+		RR42_RS05370	0.69	+1.7
1,189,041	+		RR42_RS05370	0.69	-0.6
1,189,043	+		RR42_RS05370	0.70	+1.3
1,189,044	-		RR42_RS05370	0.70	+0.2
1,189,302	+		RR42_RS05370	0.80	+0.2
1,189,302	+		RR42_RS05370	0.80	-0.2
1,189,302	+		RR42_RS05370	0.80	-1.0
1,189,303	-		RR42_RS05370	0.80	-0.2
1,189,303	-		RR42_RS05370	0.80	+1.9
1,189,305	-		RR42_RS05370	0.80	+0.7
1,189,305	-		RR42_RS05370	0.80	-0.7
1,189,491	+		RR42_RS05370	0.87	+0.2
1,189,491	+		RR42_RS05370	0.87	-0.6
1,189,491	+		RR42_RS05370	0.87	+0.5
1,189,492	-		RR42_RS05370	0.87	-1.8
1,189,492	-		RR42_RS05370	0.87	-0.1
1,189,588	-				-0.5
1,189,841	+				+0.3
1,189,841	+				-1.2
1,189,841	+				-1.0
1,189,841	+				-0.1
1,189,842	-				+0.3
1,189,842	-				-0.0
1,189,912	-		RR42_RS05375	0.16	+0.7
1,189,962	+		RR42_RS05375	0.27	-0.4
1,189,962	+		RR42_RS05375	0.27	-0.2
1,189,963	-		RR42_RS05375	0.28	-1.6
1,189,963	-		RR42_RS05375	0.28	-0.6
1,190,304	+				-0.3
1,190,305	-				+0.5
1,190,305	-				-0.6
1,190,305	-				-0.2
1,190,305	-				-0.0
1,190,374	-				-1.4
1,190,705	+		RR42_RS05380	0.63	-1.0
1,191,253	+		RR42_RS05385	0.29	+0.0
1,191,254	-		RR42_RS05385	0.29	-1.0