Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04710

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,048,472	+				+1.2
1,048,472	+				-1.1
1,048,473	-				-1.3
1,048,597	-				-0.1
1,048,800	-		RR42_RS04705	0.12	-1.1
1,048,850	+		RR42_RS04705	0.20	-0.4
1,048,889	+		RR42_RS04705	0.26	-0.1
1,048,890	-		RR42_RS04705	0.27	-0.2
1,048,890	-		RR42_RS04705	0.27	+1.0
1,048,890	-		RR42_RS04705	0.27	-0.4
1,048,890	-		RR42_RS04705	0.27	+0.4
1,049,180	+		RR42_RS04705	0.74	+2.6
1,049,259	-		RR42_RS04705	0.87	+0.5
1,049,259	-		RR42_RS04705	0.87	-1.0
1,049,315	+				-0.8
1,049,316	-				-0.3
1,049,316	-				-0.4
1,049,325	+				-0.3
1,049,325	+				+0.1
1,049,325	+				-1.1
1,049,326	-				+0.3
1,049,351	-				+0.4
1,049,400	+				-2.6
1,049,400	+				-1.2
1,049,457	-				+1.3
1,049,772	+		RR42_RS04710	0.70	-1.1
1,049,772	+		RR42_RS04710	0.70	+0.3
1,049,773	-		RR42_RS04710	0.70	-1.9
1,049,773	-		RR42_RS04710	0.70	-1.2
1,050,173	+		RR42_RS04715	0.31	+0.0
1,050,403	+		RR42_RS04715	0.61	-1.1
1,050,403	+		RR42_RS04715	0.61	+0.4
1,050,404	-		RR42_RS04715	0.62	+0.7
1,050,404	-		RR42_RS04715	0.62	-0.0
1,050,406	+		RR42_RS04715	0.62	-0.3
1,050,407	-		RR42_RS04715	0.62	-1.1
1,050,407	-		RR42_RS04715	0.62	+0.1
1,050,622	+				-0.7
1,050,623	-				-0.7
1,050,623	-				+1.3
1,050,689	+				-0.4
1,050,690	-				-0.1