Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_668 and Pf1N1B4_669 are separated by 169 nucleotides Pf1N1B4_669 and Pf1N1B4_670 overlap by 4 nucleotides Pf1N1B4_670 and Pf1N1B4_671 overlap by 14 nucleotides
Pf1N1B4_668 - Exodeoxyribonuclease I (EC 3.1.11.1), at 763,746 to 765,176
_668
Pf1N1B4_669 - INTEGRAL MEMBRANE PROTEIN (Rhomboid family), at 765,346 to 766,071
_669
Pf1N1B4_670 - FIG01248689: hypothetical protein, at 766,068 to 767,045
_670
Pf1N1B4_671 - 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases, at 767,032 to 768,576
_671
Position (kb) 765
766
767 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 764.479 kb on + strand, within Pf1N1B4_668 at 764.479 kb on + strand, within Pf1N1B4_668 at 764.479 kb on + strand, within Pf1N1B4_668 at 764.480 kb on - strand, within Pf1N1B4_668 at 764.480 kb on - strand, within Pf1N1B4_668 at 764.480 kb on - strand, within Pf1N1B4_668 at 764.480 kb on - strand, within Pf1N1B4_668 at 764.480 kb on - strand, within Pf1N1B4_668 at 764.480 kb on - strand, within Pf1N1B4_668 at 764.480 kb on - strand, within Pf1N1B4_668 at 764.511 kb on - strand, within Pf1N1B4_668 at 764.585 kb on - strand, within Pf1N1B4_668 at 764.585 kb on - strand, within Pf1N1B4_668 at 764.585 kb on - strand, within Pf1N1B4_668 at 764.586 kb on + strand, within Pf1N1B4_668 at 764.586 kb on + strand, within Pf1N1B4_668 at 764.586 kb on + strand at 764.587 kb on - strand, within Pf1N1B4_668 at 764.587 kb on - strand, within Pf1N1B4_668 at 764.587 kb on - strand, within Pf1N1B4_668 at 764.628 kb on - strand, within Pf1N1B4_668 at 764.765 kb on - strand, within Pf1N1B4_668 at 764.765 kb on - strand, within Pf1N1B4_668 at 764.827 kb on + strand, within Pf1N1B4_668 at 764.991 kb on - strand at 765.049 kb on + strand at 765.070 kb on - strand at 765.151 kb on + strand at 765.152 kb on - strand at 765.158 kb on - strand at 765.209 kb on + strand at 765.210 kb on - strand at 765.219 kb on + strand at 765.219 kb on + strand at 765.219 kb on + strand at 765.219 kb on + strand at 765.219 kb on + strand at 765.219 kb on + strand at 765.219 kb on + strand at 765.219 kb on + strand at 765.220 kb on - strand at 765.220 kb on - strand at 765.220 kb on - strand at 765.220 kb on - strand at 765.220 kb on - strand at 765.276 kb on + strand at 765.276 kb on + strand at 765.276 kb on + strand at 765.276 kb on + strand at 765.276 kb on + strand at 765.276 kb on + strand at 765.277 kb on - strand at 765.277 kb on - strand at 765.277 kb on - strand at 765.277 kb on - strand at 765.277 kb on - strand at 765.277 kb on - strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.280 kb on + strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.281 kb on - strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.284 kb on + strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.285 kb on - strand at 765.311 kb on - strand at 765.598 kb on + strand at 765.598 kb on + strand, within Pf1N1B4_669 at 765.598 kb on + strand, within Pf1N1B4_669 at 765.598 kb on + strand, within Pf1N1B4_669 at 765.598 kb on + strand, within Pf1N1B4_669 at 765.598 kb on + strand, within Pf1N1B4_669 at 765.599 kb on - strand, within Pf1N1B4_669 at 765.599 kb on - strand, within Pf1N1B4_669 at 765.599 kb on - strand, within Pf1N1B4_669 at 765.599 kb on - strand, within Pf1N1B4_669 at 765.599 kb on - strand, within Pf1N1B4_669 at 765.751 kb on + strand, within Pf1N1B4_669 at 765.987 kb on - strand, within Pf1N1B4_669 at 766.230 kb on + strand, within Pf1N1B4_670 at 766.397 kb on - strand, within Pf1N1B4_670 at 766.434 kb on + strand, within Pf1N1B4_670 at 766.434 kb on + strand, within Pf1N1B4_670 at 766.435 kb on - strand, within Pf1N1B4_670 at 766.435 kb on - strand at 766.435 kb on - strand, within Pf1N1B4_670 at 766.435 kb on - strand, within Pf1N1B4_670 at 766.435 kb on - strand, within Pf1N1B4_670 at 766.455 kb on + strand, within Pf1N1B4_670 at 766.456 kb on - strand, within Pf1N1B4_670 at 766.456 kb on - strand, within Pf1N1B4_670 at 766.456 kb on - strand, within Pf1N1B4_670 at 766.456 kb on - strand, within Pf1N1B4_670 at 766.456 kb on - strand, within Pf1N1B4_670 at 766.456 kb on - strand, within Pf1N1B4_670 at 766.500 kb on + strand, within Pf1N1B4_670 at 766.500 kb on + strand, within Pf1N1B4_670 at 766.500 kb on + strand, within Pf1N1B4_670 at 766.500 kb on + strand, within Pf1N1B4_670 at 766.500 kb on + strand, within Pf1N1B4_670 at 766.500 kb on + strand, within Pf1N1B4_670 at 766.501 kb on - strand, within Pf1N1B4_670 at 766.501 kb on - strand, within Pf1N1B4_670 at 766.501 kb on - strand, within Pf1N1B4_670 at 766.501 kb on - strand, within Pf1N1B4_670 at 766.573 kb on - strand, within Pf1N1B4_670 at 766.573 kb on - strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.575 kb on + strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.576 kb on - strand, within Pf1N1B4_670 at 766.659 kb on + strand, within Pf1N1B4_670 at 766.659 kb on + strand, within Pf1N1B4_670 at 766.660 kb on - strand, within Pf1N1B4_670 at 766.660 kb on - strand, within Pf1N1B4_670 at 766.660 kb on - strand, within Pf1N1B4_670 at 766.660 kb on - strand, within Pf1N1B4_670 at 766.701 kb on + strand, within Pf1N1B4_670 at 766.701 kb on + strand at 766.701 kb on + strand, within Pf1N1B4_670 at 766.701 kb on + strand, within Pf1N1B4_670 at 766.702 kb on - strand, within Pf1N1B4_670 at 766.702 kb on - strand at 766.702 kb on - strand, within Pf1N1B4_670 at 766.702 kb on - strand, within Pf1N1B4_670 at 766.702 kb on - strand, within Pf1N1B4_670 at 766.702 kb on - strand, within Pf1N1B4_670 at 766.702 kb on - strand, within Pf1N1B4_670 at 766.702 kb on - strand, within Pf1N1B4_670 at 766.927 kb on - strand, within Pf1N1B4_670 at 766.965 kb on + strand at 767.004 kb on + strand at 767.004 kb on + strand at 767.004 kb on + strand at 767.005 kb on - strand at 767.005 kb on - strand at 767.008 kb on + strand at 767.008 kb on + strand at 767.008 kb on + strand at 767.008 kb on + strand at 767.009 kb on - strand at 767.009 kb on - strand at 767.009 kb on - strand at 767.009 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 764,479 + Pf1N1B4_668 0.51 -2.0 764,479 + Pf1N1B4_668 0.51 -0.3 764,479 + Pf1N1B4_668 0.51 -1.3 764,480 - Pf1N1B4_668 0.51 -1.2 764,480 - Pf1N1B4_668 0.51 -0.4 764,480 - Pf1N1B4_668 0.51 +1.3 764,480 - Pf1N1B4_668 0.51 -0.3 764,480 - Pf1N1B4_668 0.51 -1.0 764,480 - Pf1N1B4_668 0.51 -3.2 764,480 - Pf1N1B4_668 0.51 +0.1 764,511 - Pf1N1B4_668 0.53 +0.7 764,585 - Pf1N1B4_668 0.59 -0.0 764,585 - Pf1N1B4_668 0.59 -0.7 764,585 - Pf1N1B4_668 0.59 +0.5 764,586 + Pf1N1B4_668 0.59 -2.2 764,586 + Pf1N1B4_668 0.59 -0.0 764,586 + +1.3 764,587 - Pf1N1B4_668 0.59 -0.1 764,587 - Pf1N1B4_668 0.59 -1.5 764,587 - Pf1N1B4_668 0.59 -2.2 764,628 - Pf1N1B4_668 0.62 -0.3 764,765 - Pf1N1B4_668 0.71 -1.7 764,765 - Pf1N1B4_668 0.71 -1.6 764,827 + Pf1N1B4_668 0.76 +1.7 764,991 - +0.7 765,049 + -1.0 765,070 - +2.3 765,151 + -0.3 765,152 - -1.2 765,158 - -0.9 765,209 + +1.0 765,210 - -0.0 765,219 + -0.0 765,219 + +0.3 765,219 + -0.3 765,219 + -1.0 765,219 + -1.0 765,219 + -0.5 765,219 + -1.5 765,219 + +0.5 765,220 - -0.5 765,220 - +0.9 765,220 - -0.2 765,220 - +1.0 765,220 - +0.1 765,276 + -0.3 765,276 + +0.7 765,276 + -0.7 765,276 + -2.5 765,276 + -0.7 765,276 + -0.5 765,277 - -0.3 765,277 - -0.0 765,277 - +0.8 765,277 - +0.4 765,277 - +1.3 765,277 - -1.0 765,280 + -1.0 765,280 + -1.4 765,280 + +1.3 765,280 + -0.0 765,280 + -0.7 765,280 + -0.4 765,280 + +1.7 765,280 + +0.6 765,280 + -0.5 765,280 + +2.3 765,280 + +2.1 765,280 + -0.5 765,280 + -0.3 765,280 + -0.2 765,280 + -0.2 765,280 + -0.2 765,280 + -1.5 765,280 + -2.4 765,280 + +0.3 765,281 - -0.7 765,281 - -0.1 765,281 - +0.1 765,281 - +0.3 765,281 - +0.1 765,281 - +0.1 765,281 - +0.0 765,281 - -0.2 765,281 - -0.0 765,281 - +1.3 765,281 - +0.5 765,281 - +0.9 765,281 - -0.3 765,281 - +1.5 765,281 - +1.3 765,281 - +0.8 765,281 - -0.4 765,281 - -1.0 765,281 - -0.6 765,281 - +0.7 765,281 - +0.3 765,284 + -0.0 765,284 + -2.0 765,284 + +0.4 765,284 + -1.7 765,284 + -0.9 765,284 + -1.5 765,284 + +1.8 765,284 + +0.3 765,284 + -0.0 765,284 + -0.0 765,284 + -1.7 765,284 + -0.3 765,284 + -0.7 765,284 + +1.3 765,284 + +0.5 765,284 + -0.1 765,284 + +0.1 765,285 - -1.3 765,285 - +0.3 765,285 - -0.6 765,285 - +0.9 765,285 - +0.9 765,285 - -0.1 765,285 - +0.5 765,285 - -0.7 765,285 - +0.4 765,285 - -0.0 765,285 - -1.0 765,285 - -0.5 765,285 - +0.7 765,285 - +0.8 765,285 - -0.5 765,285 - +1.3 765,311 - -1.0 765,598 + +1.3 765,598 + Pf1N1B4_669 0.35 +0.3 765,598 + Pf1N1B4_669 0.35 +0.5 765,598 + Pf1N1B4_669 0.35 -1.1 765,598 + Pf1N1B4_669 0.35 -2.2 765,598 + Pf1N1B4_669 0.35 -1.3 765,599 - Pf1N1B4_669 0.35 -0.5 765,599 - Pf1N1B4_669 0.35 -0.5 765,599 - Pf1N1B4_669 0.35 -0.8 765,599 - Pf1N1B4_669 0.35 -1.9 765,599 - Pf1N1B4_669 0.35 +0.3 765,751 + Pf1N1B4_669 0.56 -3.0 765,987 - Pf1N1B4_669 0.88 -0.3 766,230 + Pf1N1B4_670 0.17 -0.3 766,397 - Pf1N1B4_670 0.34 -1.0 766,434 + Pf1N1B4_670 0.37 +0.3 766,434 + Pf1N1B4_670 0.37 -2.0 766,435 - Pf1N1B4_670 0.38 -0.0 766,435 - +0.7 766,435 - Pf1N1B4_670 0.38 +0.1 766,435 - Pf1N1B4_670 0.38 +1.3 766,435 - Pf1N1B4_670 0.38 +1.3 766,455 + Pf1N1B4_670 0.40 -2.4 766,456 - Pf1N1B4_670 0.40 +1.3 766,456 - Pf1N1B4_670 0.40 -1.5 766,456 - Pf1N1B4_670 0.40 -0.0 766,456 - Pf1N1B4_670 0.40 -0.1 766,456 - Pf1N1B4_670 0.40 -1.2 766,456 - Pf1N1B4_670 0.40 -1.0 766,500 + Pf1N1B4_670 0.44 +0.3 766,500 + Pf1N1B4_670 0.44 -0.7 766,500 + Pf1N1B4_670 0.44 +1.3 766,500 + Pf1N1B4_670 0.44 -0.7 766,500 + Pf1N1B4_670 0.44 +0.9 766,500 + Pf1N1B4_670 0.44 +0.4 766,501 - Pf1N1B4_670 0.44 +0.7 766,501 - Pf1N1B4_670 0.44 -0.4 766,501 - Pf1N1B4_670 0.44 -0.8 766,501 - Pf1N1B4_670 0.44 +0.4 766,573 - Pf1N1B4_670 0.52 -0.3 766,573 - Pf1N1B4_670 0.52 -1.4 766,575 + Pf1N1B4_670 0.52 -1.3 766,575 + Pf1N1B4_670 0.52 -1.9 766,575 + Pf1N1B4_670 0.52 +0.4 766,575 + Pf1N1B4_670 0.52 +0.3 766,575 + Pf1N1B4_670 0.52 -0.4 766,575 + Pf1N1B4_670 0.52 -0.3 766,575 + Pf1N1B4_670 0.52 -0.1 766,575 + Pf1N1B4_670 0.52 +0.7 766,575 + Pf1N1B4_670 0.52 -0.3 766,575 + Pf1N1B4_670 0.52 -0.6 766,576 - Pf1N1B4_670 0.52 -1.0 766,576 - Pf1N1B4_670 0.52 +1.3 766,576 - Pf1N1B4_670 0.52 +0.3 766,576 - Pf1N1B4_670 0.52 +0.4 766,576 - Pf1N1B4_670 0.52 -0.7 766,576 - Pf1N1B4_670 0.52 -0.8 766,576 - Pf1N1B4_670 0.52 -1.0 766,576 - Pf1N1B4_670 0.52 +0.2 766,576 - Pf1N1B4_670 0.52 -0.1 766,659 + Pf1N1B4_670 0.60 +0.3 766,659 + Pf1N1B4_670 0.60 -0.7 766,660 - Pf1N1B4_670 0.61 -0.0 766,660 - Pf1N1B4_670 0.61 +0.1 766,660 - Pf1N1B4_670 0.61 -1.0 766,660 - Pf1N1B4_670 0.61 +0.5 766,701 + Pf1N1B4_670 0.65 +0.5 766,701 + -0.7 766,701 + Pf1N1B4_670 0.65 +0.5 766,701 + Pf1N1B4_670 0.65 -0.0 766,702 - Pf1N1B4_670 0.65 -0.1 766,702 - +3.6 766,702 - Pf1N1B4_670 0.65 -1.9 766,702 - Pf1N1B4_670 0.65 -1.5 766,702 - Pf1N1B4_670 0.65 -2.0 766,702 - Pf1N1B4_670 0.65 -0.4 766,702 - Pf1N1B4_670 0.65 -0.6 766,702 - Pf1N1B4_670 0.65 -0.1 766,927 - Pf1N1B4_670 0.88 -0.6 766,965 + +0.9 767,004 + +0.3 767,004 + +1.3 767,004 + +0.1 767,005 - +1.0 767,005 - -0.2 767,008 + +0.5 767,008 + +1.3 767,008 + -0.9 767,008 + -1.9 767,009 - +0.4 767,009 - +0.3 767,009 - +1.3 767,009 - -1.3
Or see this region's nucleotide sequence