Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00215 and HSERO_RS00220 are separated by 91 nucleotides HSERO_RS00220 and HSERO_RS00225 are separated by 472 nucleotides HSERO_RS00225 and HSERO_RS00230 are separated by 489 nucleotides
HSERO_RS00215: HSERO_RS00215 - hypothetical protein, at 57,620 to 57,916
_RS00215
HSERO_RS00220: HSERO_RS00220 - hypothetical protein, at 58,008 to 58,412
_RS00220
HSERO_RS00225: HSERO_RS00225 - glutamine amidotransferase, at 58,885 to 59,634
_RS00225
HSERO_RS00230: HSERO_RS00230 - hypothetical protein, at 60,124 to 60,444
_RS00230
Position (kb) 58
59
60 Strain fitness (log2 ratio) -2
-1
0
1 at 58.028 kb on - strand at 58.028 kb on - strand at 58.039 kb on + strand at 58.039 kb on + strand at 58.040 kb on - strand at 58.044 kb on + strand at 58.089 kb on + strand at 58.197 kb on + strand, within HSERO_RS00220 at 58.415 kb on - strand at 58.429 kb on + strand at 58.461 kb on - strand at 58.473 kb on + strand at 58.542 kb on + strand at 58.590 kb on - strand at 58.640 kb on - strand at 58.856 kb on - strand at 58.887 kb on + strand at 58.898 kb on + strand at 58.906 kb on - strand at 58.906 kb on - strand at 58.906 kb on - strand at 58.964 kb on + strand, within HSERO_RS00225 at 58.972 kb on - strand, within HSERO_RS00225 at 59.000 kb on + strand, within HSERO_RS00225 at 59.010 kb on + strand, within HSERO_RS00225 at 59.070 kb on - strand, within HSERO_RS00225 at 59.072 kb on - strand, within HSERO_RS00225 at 59.147 kb on + strand, within HSERO_RS00225 at 59.155 kb on - strand, within HSERO_RS00225 at 59.155 kb on - strand, within HSERO_RS00225 at 59.187 kb on - strand, within HSERO_RS00225 at 59.193 kb on + strand, within HSERO_RS00225 at 59.297 kb on + strand, within HSERO_RS00225 at 59.377 kb on + strand, within HSERO_RS00225 at 59.385 kb on - strand, within HSERO_RS00225 at 59.391 kb on - strand, within HSERO_RS00225 at 59.935 kb on + strand at 60.241 kb on + strand, within HSERO_RS00230
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 58,028 - -0.1 58,028 - +0.3 58,039 + -2.2 58,039 + -1.1 58,040 - +0.3 58,044 + +0.7 58,089 + +1.5 58,197 + HSERO_RS00220 0.47 -0.9 58,415 - +1.3 58,429 + -0.3 58,461 - +0.3 58,473 + +0.3 58,542 + -0.2 58,590 - -0.3 58,640 - +0.2 58,856 - -1.3 58,887 + -0.9 58,898 + -0.6 58,906 - -0.1 58,906 - -0.7 58,906 - +0.0 58,964 + HSERO_RS00225 0.11 -0.1 58,972 - HSERO_RS00225 0.12 -0.2 59,000 + HSERO_RS00225 0.15 -0.1 59,010 + HSERO_RS00225 0.17 -0.2 59,070 - HSERO_RS00225 0.25 -0.2 59,072 - HSERO_RS00225 0.25 -0.3 59,147 + HSERO_RS00225 0.35 +1.0 59,155 - HSERO_RS00225 0.36 +1.7 59,155 - HSERO_RS00225 0.36 +0.2 59,187 - HSERO_RS00225 0.40 +0.3 59,193 + HSERO_RS00225 0.41 +0.2 59,297 + HSERO_RS00225 0.55 -0.1 59,377 + HSERO_RS00225 0.66 -1.0 59,385 - HSERO_RS00225 0.67 +0.3 59,391 - HSERO_RS00225 0.67 -0.4 59,935 + -0.6 60,241 + HSERO_RS00230 0.36 -0.8
Or see this region's nucleotide sequence