Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03022

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
3,174,828	+		CCNA_03020	0.28	-0.6
3,174,831	+		CCNA_03020	0.29	-0.3
3,174,831	+		CCNA_03020	0.29	-0.9
3,174,831	+		CCNA_03020	0.29	-0.8
3,174,839	+		CCNA_03020	0.29	+0.3
3,174,839	-		CCNA_03020	0.29	-0.1
3,174,839	-		CCNA_03020	0.29	-0.2
3,174,839	-		CCNA_03020	0.29	-0.1
3,174,839	-		CCNA_03020	0.29	-1.1
3,174,868	+		CCNA_03020	0.32	-1.0
3,174,891	-		CCNA_03020	0.34	-0.8
3,174,892	+		CCNA_03020	0.34	-0.5
3,174,893	-		CCNA_03020	0.34	-1.6
3,174,897	+		CCNA_03020	0.34	-1.8
3,174,943	-		CCNA_03020	0.39	-0.1
3,174,951	+		CCNA_03020	0.39	+0.0
3,174,954	-		CCNA_03020	0.40	-1.2
3,174,956	-		CCNA_03020	0.40	-0.2
3,174,958	+		CCNA_03020	0.40	+0.4
3,174,969	+		CCNA_03020	0.41	+0.2
3,175,004	-		CCNA_03020	0.44	-1.0
3,175,046	+		CCNA_03020	0.48	+0.3
3,175,054	+		CCNA_03020	0.48	-1.0
3,175,054	+		CCNA_03020	0.48	+0.2
3,175,062	-		CCNA_03020	0.49	-1.5
3,175,062	-		CCNA_03020	0.49	+0.9
3,175,077	+		CCNA_03020	0.50	-0.4
3,175,080	-		CCNA_03020	0.51	-0.1
3,175,098	+		CCNA_03020	0.52	-0.4
3,175,110	+		CCNA_03020	0.53	-1.0
3,175,116	-		CCNA_03020	0.54	-0.2
3,175,116	-		CCNA_03020	0.54	+0.2
3,175,116	-		CCNA_03020	0.54	-1.9
3,175,133	+		CCNA_03020	0.55	-0.3
3,175,136	-		CCNA_03020	0.56	-0.1
3,175,141	-		CCNA_03020	0.56	+0.3
3,175,143	+		CCNA_03020	0.56	-1.2
3,175,144	+		CCNA_03020	0.56	+0.4
3,175,144	+		CCNA_03020	0.56	-1.5
3,175,152	-		CCNA_03020	0.57	+0.4
3,175,152	-		CCNA_03020	0.57	+0.6
3,175,152	-		CCNA_03020	0.57	-0.9
3,175,155	+		CCNA_03020	0.57	-0.3
3,175,155	+		CCNA_03020	0.57	-1.0
3,175,155	+		CCNA_03020	0.57	+1.0
3,175,155	+		CCNA_03020	0.57	-0.9
3,175,155	+		CCNA_03020	0.57	+1.5
3,175,155	+		CCNA_03020	0.57	-0.7
3,175,155	+		CCNA_03020	0.57	+0.1
3,175,155	+		CCNA_03020	0.57	+0.1
3,175,155	+		CCNA_03020	0.57	-1.8
3,175,155	+		CCNA_03020	0.57	-1.7
3,175,163	-		CCNA_03020	0.58	-0.5
3,175,163	-		CCNA_03020	0.58	-0.2
3,175,163	-		CCNA_03020	0.58	+0.4
3,175,163	-		CCNA_03020	0.58	+1.8
3,175,163	-		CCNA_03020	0.58	+0.2
3,175,163	-		CCNA_03020	0.58	-0.6
3,175,163	-		CCNA_03020	0.58	-0.8
3,175,163	-		CCNA_03020	0.58	-0.4
3,175,163	-		CCNA_03020	0.58	-0.2
3,175,163	-		CCNA_03020	0.58	+0.9
3,175,177	+		CCNA_03020	0.59	+0.1
3,175,177	+		CCNA_03020	0.59	-0.2
3,175,185	-		CCNA_03020	0.60	-0.3
3,175,216	+		CCNA_03020	0.63	-0.7
3,175,221	+		CCNA_03020	0.63	-1.6
3,175,298	-		CCNA_03020	0.70	-0.1
3,175,300	+		CCNA_03020	0.70	-1.1
3,175,313	-		CCNA_03020	0.71	-0.1
3,175,340	+		CCNA_03020	0.74	-0.8
3,175,346	+		CCNA_03020	0.74	-0.5
3,175,348	-		CCNA_03020	0.74	-0.2
3,175,371	-		CCNA_03020	0.77	-0.5
3,175,433	-		CCNA_03020	0.82	-1.1
3,175,435	+		CCNA_03020	0.82	+0.5
3,175,474	+		CCNA_03020	0.86	-0.9
3,175,474	+		CCNA_03020	0.86	+0.1
3,175,487	-		CCNA_03020	0.87	-0.2
3,175,512	+		CCNA_03020	0.89	+0.1
3,175,512	+		CCNA_03020	0.89	-1.5
3,175,515	-		CCNA_03020	0.89	+3.3
3,175,522	+		CCNA_03020	0.90	+0.0
3,175,578	+				-0.2
3,175,578	+				-2.2
3,175,586	-				+0.9
3,175,621	-				+1.4
3,175,636	-				+0.8
3,175,666	+				+0.1
3,175,669	-		CCNA_03021	0.11	+0.8
3,175,674	-		CCNA_03021	0.14	+2.0
3,175,716	+		CCNA_03021	0.33	-0.4
3,175,728	-		CCNA_03021	0.39	+1.5
3,175,750	-		CCNA_03021	0.49	+1.5
3,175,761	+		CCNA_03021	0.54	-2.2
3,175,764	-		CCNA_03021	0.56	+1.3
3,175,769	-		CCNA_03021	0.58	+2.4
3,175,769	-		CCNA_03021	0.58	+1.5
3,175,808	+		CCNA_03021	0.77	+0.6
3,175,808	+		CCNA_03021	0.77	-1.3
3,175,812	+		CCNA_03021	0.78	-1.0
3,175,821	-		CCNA_03021	0.83	+2.2
3,175,831	-				+1.7
3,175,837	+				-1.7
3,175,837	+				-0.3
3,175,845	-				+3.3
3,175,894	+				-0.9
3,175,925	-				+0.9
3,175,925	-				+1.4
3,175,925	-				+0.9
3,175,942	+				+0.5
3,175,964	+		CCNA_03022	0.12	-0.5
3,175,965	+		CCNA_03022	0.12	+1.7
3,175,965	+		CCNA_03022	0.12	-0.2
3,175,973	-		CCNA_03022	0.12	+0.6
3,175,976	+		CCNA_03022	0.13	+2.0
3,175,979	-		CCNA_03022	0.13	+1.1
3,176,028	+		CCNA_03022	0.17	-0.7
3,176,033	+		CCNA_03022	0.17	+1.4
3,176,033	+		CCNA_03022	0.17	+1.2
3,176,041	-		CCNA_03022	0.18	+1.5
3,176,041	-		CCNA_03022	0.18	+0.2
3,176,041	-		CCNA_03022	0.18	+2.2
3,176,043	+		CCNA_03022	0.18	-0.8
3,176,051	-		CCNA_03022	0.19	+1.1
3,176,051	-		CCNA_03022	0.19	+1.3
3,176,051	-		CCNA_03022	0.19	+0.3
3,176,071	+		CCNA_03022	0.21	+0.0
3,176,084	-		CCNA_03022	0.22	-0.7
3,176,091	+		CCNA_03022	0.22	+0.1
3,176,139	+		CCNA_03022	0.26	+1.5
3,176,143	+		CCNA_03022	0.27	-0.8
3,176,193	+		CCNA_03022	0.31	+0.3
3,176,196	-		CCNA_03022	0.31	-0.0
3,176,198	+		CCNA_03022	0.31	+0.5
3,176,201	-		CCNA_03022	0.32	+1.3
3,176,217	+		CCNA_03022	0.33	-0.3
3,176,217	+		CCNA_03022	0.33	-0.6
3,176,225	-		CCNA_03022	0.34	+1.2
3,176,225	-		CCNA_03022	0.34	+0.8
3,176,225	-		CCNA_03022	0.34	+1.3
3,176,237	+		CCNA_03022	0.35	-1.6
3,176,237	+		CCNA_03022	0.35	-0.6
3,176,320	-		CCNA_03022	0.42	+0.6
3,176,353	-		CCNA_03022	0.44	+1.9
3,176,353	-		CCNA_03022	0.44	+1.9
3,176,362	-		CCNA_03022	0.45	+1.0
3,176,385	+		CCNA_03022	0.47	-0.4
3,176,385	+		CCNA_03022	0.47	-1.7
3,176,393	-		CCNA_03022	0.48	+1.0
3,176,393	-		CCNA_03022	0.48	+1.4
3,176,393	-		CCNA_03022	0.48	+0.7
3,176,421	-		CCNA_03022	0.50	+2.0
3,176,427	+		CCNA_03022	0.51	-0.7
3,176,433	-		CCNA_03022	0.51	+1.5
3,176,450	+		CCNA_03022	0.53	-2.0
3,176,491	+		CCNA_03022	0.56	-1.4
3,176,503	+		CCNA_03022	0.57	-0.7
3,176,578	+		CCNA_03022	0.63	-1.0
3,176,583	+		CCNA_03022	0.64	-0.1
3,176,586	-		CCNA_03022	0.64	+1.5
3,176,605	-		CCNA_03022	0.66	+1.4
3,176,605	-		CCNA_03022	0.66	+1.8
3,176,638	+		CCNA_03022	0.68	-0.7
3,176,646	-		CCNA_03022	0.69	+1.6
3,176,676	+		CCNA_03022	0.72	+0.1
3,176,676	+		CCNA_03022	0.72	-0.8
3,176,682	+		CCNA_03022	0.72	-0.3
3,176,682	+		CCNA_03022	0.72	-0.6
3,176,682	+		CCNA_03022	0.72	+0.5
3,176,690	-		CCNA_03022	0.73	+1.1
3,176,718	+		CCNA_03022	0.75	-0.6
3,176,718	+		CCNA_03022	0.75	+0.2
3,176,726	-		CCNA_03022	0.76	+2.1
3,176,726	-		CCNA_03022	0.76	+2.2
3,176,729	+		CCNA_03022	0.76	-3.0
3,176,734	+		CCNA_03022	0.77	-2.4
3,176,741	+		CCNA_03022	0.77	-0.2
3,176,741	+		CCNA_03022	0.77	+1.0
3,176,741	+		CCNA_03022	0.77	-1.1
3,176,741	+				+1.1
3,176,749	-		CCNA_03022	0.78	+1.2
3,176,749	-		CCNA_03022	0.78	+1.3
3,176,749	-		CCNA_03022	0.78	+1.9
3,176,759	-		CCNA_03022	0.79	+1.2
3,176,759	-		CCNA_03022	0.79	+1.7
3,176,759	-		CCNA_03022	0.79	+2.0
3,176,767	+		CCNA_03022	0.79	-1.3
3,176,794	-		CCNA_03022	0.82	+1.3
3,176,854	+		CCNA_03022	0.87	-1.1
3,176,862	-		CCNA_03022	0.87	+1.0
3,176,864	+		CCNA_03022	0.88	-0.8
3,176,872	-		CCNA_03022	0.88	+2.4
3,176,964	+				-1.6
3,176,976	-				+1.8
3,176,976	-				+1.5
3,176,976	-				+1.4
3,176,981	-				+2.7
3,176,981	-				+1.4
3,177,063	-				+1.8
3,177,078	-				+1.8
3,177,094	+				-1.2
3,177,094	+				-1.3
3,177,102	-				+1.8
3,177,143	-		CCNA_03023	0.10	+2.0
3,177,153	-		CCNA_03023	0.11	+1.8
3,177,153	-		CCNA_03023	0.11	+1.2
3,177,155	+		CCNA_03023	0.11	-1.3
3,177,155	+		CCNA_03023	0.11	-0.5
3,177,155	+		CCNA_03023	0.11	-0.7
3,177,156	+		CCNA_03023	0.11	+0.1
3,177,163	-		CCNA_03023	0.11	+1.7
3,177,163	-		CCNA_03023	0.11	+3.1
3,177,186	+		CCNA_03023	0.12	+3.1
3,177,187	-		CCNA_03023	0.12	+1.9
3,177,188	-		CCNA_03023	0.12	+2.5
3,177,194	-		CCNA_03023	0.13	+1.6
3,177,215	-		CCNA_03023	0.14	-0.7
3,177,222	-		CCNA_03023	0.14	+0.8
3,177,240	+		CCNA_03023	0.15	+0.3
3,177,252	+		CCNA_03023	0.15	-0.8
3,177,260	-		CCNA_03023	0.16	-0.5
3,177,287	+		CCNA_03023	0.17	-1.6
3,177,290	-		CCNA_03023	0.17	+1.6
3,177,290	-		CCNA_03023	0.17	+1.7
3,177,290	-		CCNA_03023	0.17	+2.2
3,177,393	+		CCNA_03023	0.22	-0.5
3,177,393	+		CCNA_03023	0.22	-1.4
3,177,411	+		CCNA_03023	0.23	-0.8
3,177,438	+		CCNA_03023	0.24	-0.1
3,177,452	+		CCNA_03023	0.25	-1.1
3,177,469	-		CCNA_03023	0.25	+1.0
3,177,475	-		CCNA_03023	0.26	+2.5
3,177,482	-		CCNA_03023	0.26	+1.5
3,177,492	+		CCNA_03023	0.26	-0.7
3,177,507	+		CCNA_03023	0.27	-0.7
3,177,523	+		CCNA_03023	0.28	-1.6
3,177,552	+		CCNA_03023	0.29	-1.0
3,177,552	+		CCNA_03023	0.29	+1.4
3,177,552	+		CCNA_03023	0.29	-1.7
3,177,557	+		CCNA_03023	0.29	-0.8
3,177,560	-		CCNA_03023	0.30	+2.0
3,177,560	-		CCNA_03023	0.30	+1.5
3,177,592	-		CCNA_03023	0.31	+1.4
3,177,611	+		CCNA_03023	0.32	-0.2
3,177,624	+		CCNA_03023	0.32	-1.4
3,177,630	+		CCNA_03023	0.33	-1.2
3,177,630	+		CCNA_03023	0.33	-2.0
3,177,638	-		CCNA_03023	0.33	+2.3
3,177,640	-		CCNA_03023	0.33	+2.4
3,177,658	-		CCNA_03023	0.34	+1.1
3,177,716	+		CCNA_03023	0.37	-1.7
3,177,716	+		CCNA_03023	0.37	-0.7
3,177,724	-		CCNA_03023	0.37	+2.5
3,177,724	-		CCNA_03023	0.37	+1.2
3,177,724	-		CCNA_03023	0.37	+0.3
3,177,724	-		CCNA_03023	0.37	+1.1
3,177,724	-		CCNA_03023	0.37	+1.0
3,177,780	+		CCNA_03023	0.40	+0.1
3,177,780	+		CCNA_03023	0.40	+1.1
3,177,917	+		CCNA_03023	0.46	-0.3
3,177,926	+		CCNA_03023	0.46	-0.7
3,177,926	+		CCNA_03023	0.46	-1.4
3,177,927	+		CCNA_03023	0.46	+0.4
3,177,927	+		CCNA_03023	0.46	-0.7
3,177,936	+		CCNA_03023	0.47	-1.4
3,177,944	-		CCNA_03023	0.47	+1.8
3,177,963	+		CCNA_03023	0.48	+1.5