Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13435 and AO356_13440 are separated by 249 nucleotides AO356_13440 and AO356_13445 are separated by 123 nucleotides
AO356_13435: AO356_13435 - peptidase P60, at 3,046,925 to 3,047,536
_13435
AO356_13440: AO356_13440 - hypothetical protein, at 3,047,786 to 3,048,214
_13440
AO356_13445: AO356_13445 - dihydroorotase, at 3,048,338 to 3,049,609
_13445
Position (kb)
3047
3048
3049 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.986 kb on + strand at 3046.986 kb on + strand at 3046.986 kb on + strand at 3046.986 kb on + strand at 3046.987 kb on - strand, within AO356_13435 at 3046.987 kb on - strand, within AO356_13435 at 3047.002 kb on - strand, within AO356_13435 at 3047.002 kb on - strand, within AO356_13435 at 3047.002 kb on - strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.077 kb on - strand, within AO356_13435 at 3047.077 kb on - strand, within AO356_13435 at 3047.077 kb on - strand, within AO356_13435 at 3047.077 kb on - strand, within AO356_13435 at 3047.153 kb on + strand, within AO356_13435 at 3047.153 kb on + strand, within AO356_13435 at 3047.154 kb on - strand, within AO356_13435 at 3047.226 kb on + strand, within AO356_13435 at 3047.227 kb on - strand, within AO356_13435 at 3047.257 kb on + strand, within AO356_13435 at 3047.257 kb on + strand, within AO356_13435 at 3047.257 kb on + strand, within AO356_13435 at 3047.258 kb on - strand, within AO356_13435 at 3047.258 kb on - strand, within AO356_13435 at 3047.258 kb on - strand, within AO356_13435 at 3047.258 kb on - strand, within AO356_13435 at 3047.283 kb on + strand, within AO356_13435 at 3047.283 kb on + strand, within AO356_13435 at 3047.284 kb on - strand, within AO356_13435 at 3047.298 kb on - strand, within AO356_13435 at 3047.436 kb on + strand, within AO356_13435 at 3047.436 kb on + strand, within AO356_13435 at 3047.436 kb on + strand, within AO356_13435 at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.498 kb on + strand at 3047.499 kb on - strand at 3047.538 kb on - strand at 3047.550 kb on + strand at 3047.550 kb on + strand at 3047.550 kb on + strand at 3047.551 kb on - strand at 3047.570 kb on + strand at 3047.570 kb on + strand at 3047.572 kb on + strand at 3047.572 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.795 kb on + strand at 3047.796 kb on - strand at 3047.883 kb on - strand, within AO356_13440 at 3047.883 kb on - strand, within AO356_13440 at 3047.883 kb on - strand, within AO356_13440 at 3047.886 kb on - strand, within AO356_13440 at 3048.020 kb on + strand, within AO356_13440 at 3048.020 kb on + strand, within AO356_13440 at 3048.021 kb on - strand, within AO356_13440 at 3048.066 kb on + strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.077 kb on + strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.103 kb on + strand, within AO356_13440 at 3048.103 kb on + strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.107 kb on + strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.185 kb on - strand at 3048.185 kb on - strand at 3048.212 kb on + strand at 3048.213 kb on - strand at 3048.230 kb on - strand at 3048.323 kb on - strand at 3048.375 kb on + strand at 3048.832 kb on - strand, within AO356_13445 at 3049.105 kb on - strand, within AO356_13445
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,046,982 + +0.4 3,046,982 + -0.6 3,046,982 + -0.1 3,046,982 + +1.2 3,046,982 + -1.4 3,046,982 + +0.1 3,046,983 - -0.5 3,046,983 - +0.8 3,046,983 - -1.0 3,046,983 - +1.0 3,046,983 - -0.7 3,046,983 - -0.2 3,046,983 - +0.6 3,046,983 - -1.1 3,046,986 + +0.8 3,046,986 + +0.7 3,046,986 + -0.2 3,046,986 + +0.4 3,046,987 - AO356_13435 0.10 +1.5 3,046,987 - AO356_13435 0.10 +0.5 3,047,002 - AO356_13435 0.13 +0.1 3,047,002 - AO356_13435 0.13 -1.6 3,047,002 - AO356_13435 0.13 +0.9 3,047,076 + AO356_13435 0.25 -0.0 3,047,076 + AO356_13435 0.25 -0.6 3,047,076 + AO356_13435 0.25 +0.1 3,047,076 + AO356_13435 0.25 +0.6 3,047,076 + AO356_13435 0.25 +0.4 3,047,076 + AO356_13435 0.25 -0.4 3,047,076 + AO356_13435 0.25 -0.2 3,047,077 - AO356_13435 0.25 -0.9 3,047,077 - AO356_13435 0.25 +0.1 3,047,077 - AO356_13435 0.25 +0.2 3,047,077 - AO356_13435 0.25 -2.1 3,047,153 + AO356_13435 0.37 +0.1 3,047,153 + AO356_13435 0.37 -0.0 3,047,154 - AO356_13435 0.37 -0.9 3,047,226 + AO356_13435 0.49 +0.5 3,047,227 - AO356_13435 0.49 -0.4 3,047,257 + AO356_13435 0.54 +0.0 3,047,257 + AO356_13435 0.54 -0.3 3,047,257 + AO356_13435 0.54 -0.6 3,047,258 - AO356_13435 0.54 -0.1 3,047,258 - AO356_13435 0.54 +0.4 3,047,258 - AO356_13435 0.54 +0.2 3,047,258 - AO356_13435 0.54 -0.7 3,047,283 + AO356_13435 0.58 -0.2 3,047,283 + AO356_13435 0.58 +0.4 3,047,284 - AO356_13435 0.59 -0.2 3,047,298 - AO356_13435 0.61 +0.5 3,047,436 + AO356_13435 0.83 +0.9 3,047,436 + AO356_13435 0.83 -1.3 3,047,436 + AO356_13435 0.83 -0.5 3,047,495 + +0.2 3,047,495 + +0.7 3,047,495 + -0.3 3,047,495 + -0.5 3,047,495 + +0.6 3,047,496 - +1.6 3,047,496 - -0.6 3,047,496 - +0.9 3,047,496 - +1.1 3,047,496 - -0.4 3,047,496 - -0.4 3,047,496 - +0.0 3,047,496 - -0.5 3,047,498 + +1.5 3,047,499 - +0.5 3,047,538 - -0.5 3,047,550 + +0.2 3,047,550 + -0.0 3,047,550 + +0.4 3,047,551 - +0.1 3,047,570 + +0.1 3,047,570 + +0.8 3,047,572 + +1.4 3,047,572 + +0.7 3,047,623 + +2.0 3,047,623 + -0.4 3,047,623 + +0.2 3,047,623 + +0.5 3,047,623 + +0.5 3,047,623 + -1.2 3,047,623 + -0.2 3,047,624 - +0.5 3,047,624 - -0.4 3,047,624 - +0.1 3,047,624 - -0.2 3,047,795 + -0.7 3,047,796 - -0.2 3,047,883 - AO356_13440 0.23 -0.2 3,047,883 - AO356_13440 0.23 -0.8 3,047,883 - AO356_13440 0.23 +0.2 3,047,886 - AO356_13440 0.23 -0.7 3,048,020 + AO356_13440 0.55 -0.9 3,048,020 + AO356_13440 0.55 +0.8 3,048,021 - AO356_13440 0.55 +0.4 3,048,066 + AO356_13440 0.65 -0.2 3,048,067 - AO356_13440 0.66 +0.2 3,048,067 - AO356_13440 0.66 -1.0 3,048,067 - AO356_13440 0.66 -0.2 3,048,067 - AO356_13440 0.66 -0.4 3,048,067 - AO356_13440 0.66 +0.1 3,048,077 + AO356_13440 0.68 -0.3 3,048,078 - AO356_13440 0.68 +0.5 3,048,078 - AO356_13440 0.68 +0.2 3,048,078 - AO356_13440 0.68 -0.0 3,048,078 - AO356_13440 0.68 -0.6 3,048,078 - AO356_13440 0.68 -0.9 3,048,078 - AO356_13440 0.68 -0.4 3,048,103 + AO356_13440 0.74 -0.2 3,048,103 + AO356_13440 0.74 -0.3 3,048,104 - AO356_13440 0.74 +0.3 3,048,104 - AO356_13440 0.74 -0.9 3,048,104 - AO356_13440 0.74 +0.2 3,048,107 + AO356_13440 0.75 +0.4 3,048,108 - AO356_13440 0.75 -1.5 3,048,108 - AO356_13440 0.75 +0.2 3,048,108 - AO356_13440 0.75 -1.1 3,048,146 + AO356_13440 0.84 -0.5 3,048,146 + AO356_13440 0.84 +0.8 3,048,146 + AO356_13440 0.84 +0.1 3,048,147 - AO356_13440 0.84 -0.2 3,048,147 - AO356_13440 0.84 -1.2 3,048,147 - AO356_13440 0.84 -0.1 3,048,147 - AO356_13440 0.84 -0.1 3,048,147 - AO356_13440 0.84 -0.2 3,048,147 - AO356_13440 0.84 +0.4 3,048,184 + -0.4 3,048,184 + +0.0 3,048,184 + +0.0 3,048,184 + +0.0 3,048,185 - +0.6 3,048,185 - +0.5 3,048,212 + +1.2 3,048,213 - -0.3 3,048,230 - -0.6 3,048,323 - +0.2 3,048,375 + +0.6 3,048,832 - AO356_13445 0.39 +0.2 3,049,105 - AO356_13445 0.60 -0.4
Or see this region's nucleotide sequence