Experiment: KB with Erythromycin 25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4273 and Psyr_4274 are separated by 284 nucleotides Psyr_4274 and Psyr_4275 are separated by 6 nucleotides
Psyr_4273: Psyr_4273 - Carbon starvation protein CstA, at 5,096,778 to 5,098,853
_4273
Psyr_4274: Psyr_4274 - conserved hypothetical protein, at 5,099,138 to 5,099,506
_4274
Psyr_4275: Psyr_4275 - DNA replication and repair protein RadA, at 5,099,513 to 5,100,880
_4275
Position (kb) 5099
5100 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5098.210 kb on + strand, within Psyr_4273 at 5098.210 kb on + strand, within Psyr_4273 at 5098.210 kb on + strand, within Psyr_4273 at 5098.210 kb on + strand, within Psyr_4273 at 5098.210 kb on + strand, within Psyr_4273 at 5098.211 kb on - strand, within Psyr_4273 at 5098.211 kb on - strand, within Psyr_4273 at 5098.211 kb on - strand, within Psyr_4273 at 5098.217 kb on + strand, within Psyr_4273 at 5098.217 kb on + strand, within Psyr_4273 at 5098.217 kb on + strand, within Psyr_4273 at 5098.218 kb on - strand, within Psyr_4273 at 5098.218 kb on - strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.219 kb on + strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.220 kb on - strand, within Psyr_4273 at 5098.373 kb on + strand, within Psyr_4273 at 5098.508 kb on - strand, within Psyr_4273 at 5098.606 kb on + strand, within Psyr_4273 at 5098.606 kb on + strand, within Psyr_4273 at 5098.606 kb on + strand, within Psyr_4273 at 5098.606 kb on + strand, within Psyr_4273 at 5098.606 kb on + strand, within Psyr_4273 at 5098.607 kb on - strand, within Psyr_4273 at 5098.607 kb on - strand, within Psyr_4273 at 5098.607 kb on - strand, within Psyr_4273 at 5098.607 kb on - strand, within Psyr_4273 at 5098.607 kb on - strand, within Psyr_4273 at 5098.607 kb on - strand, within Psyr_4273 at 5098.607 kb on - strand, within Psyr_4273 at 5098.607 kb on - strand, within Psyr_4273 at 5098.690 kb on + strand at 5098.690 kb on + strand at 5098.690 kb on + strand at 5098.690 kb on + strand at 5098.690 kb on + strand at 5098.690 kb on + strand at 5098.690 kb on + strand at 5098.691 kb on - strand at 5098.691 kb on - strand at 5098.691 kb on - strand at 5098.691 kb on - strand at 5098.691 kb on - strand at 5098.711 kb on + strand at 5098.711 kb on + strand at 5098.711 kb on + strand at 5098.711 kb on + strand at 5098.711 kb on + strand at 5098.711 kb on + strand at 5098.711 kb on + strand at 5098.711 kb on + strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.712 kb on - strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.715 kb on + strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.716 kb on - strand at 5098.719 kb on + strand at 5098.720 kb on - strand at 5098.839 kb on - strand at 5098.839 kb on - strand at 5098.841 kb on + strand at 5098.841 kb on + strand at 5098.844 kb on + strand at 5098.844 kb on + strand at 5098.877 kb on + strand at 5098.877 kb on + strand at 5098.877 kb on + strand at 5098.877 kb on + strand at 5098.877 kb on + strand at 5098.878 kb on - strand at 5098.938 kb on + strand at 5098.938 kb on + strand at 5098.938 kb on + strand at 5098.939 kb on - strand at 5098.976 kb on + strand at 5099.042 kb on + strand at 5099.042 kb on + strand at 5099.058 kb on + strand at 5099.059 kb on - strand at 5099.088 kb on + strand at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.339 kb on + strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.340 kb on - strand, within Psyr_4274 at 5099.514 kb on + strand at 5099.514 kb on + strand at 5099.907 kb on - strand, within Psyr_4275 at 5100.009 kb on - strand, within Psyr_4275 at 5100.168 kb on + strand, within Psyr_4275 at 5100.168 kb on + strand, within Psyr_4275 at 5100.168 kb on + strand, within Psyr_4275 at 5100.168 kb on + strand, within Psyr_4275 at 5100.169 kb on - strand, within Psyr_4275 at 5100.169 kb on - strand, within Psyr_4275
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Erythromycin 25 ug/ml remove 5,098,210 + Psyr_4273 0.69 -0.2 5,098,210 + Psyr_4273 0.69 +0.3 5,098,210 + Psyr_4273 0.69 -0.6 5,098,210 + Psyr_4273 0.69 -0.2 5,098,210 + Psyr_4273 0.69 -0.2 5,098,211 - Psyr_4273 0.69 +0.1 5,098,211 - Psyr_4273 0.69 +0.4 5,098,211 - Psyr_4273 0.69 -0.2 5,098,217 + Psyr_4273 0.69 +1.5 5,098,217 + Psyr_4273 0.69 -0.9 5,098,217 + Psyr_4273 0.69 -0.1 5,098,218 - Psyr_4273 0.69 -0.5 5,098,218 - Psyr_4273 0.69 +0.1 5,098,219 + Psyr_4273 0.69 -0.4 5,098,219 + Psyr_4273 0.69 -0.6 5,098,219 + Psyr_4273 0.69 -1.2 5,098,219 + Psyr_4273 0.69 -0.1 5,098,219 + Psyr_4273 0.69 -2.1 5,098,219 + Psyr_4273 0.69 +0.1 5,098,219 + Psyr_4273 0.69 -0.7 5,098,219 + Psyr_4273 0.69 +0.1 5,098,219 + Psyr_4273 0.69 +0.1 5,098,219 + Psyr_4273 0.69 -0.7 5,098,219 + Psyr_4273 0.69 +0.5 5,098,219 + Psyr_4273 0.69 -1.5 5,098,219 + Psyr_4273 0.69 -0.3 5,098,220 - Psyr_4273 0.69 +0.4 5,098,220 - Psyr_4273 0.69 -1.3 5,098,220 - Psyr_4273 0.69 +0.4 5,098,220 - Psyr_4273 0.69 +0.6 5,098,220 - Psyr_4273 0.69 +0.7 5,098,220 - Psyr_4273 0.69 -0.2 5,098,220 - Psyr_4273 0.69 +0.2 5,098,220 - Psyr_4273 0.69 -0.5 5,098,220 - Psyr_4273 0.69 -1.0 5,098,220 - Psyr_4273 0.69 +0.6 5,098,220 - Psyr_4273 0.69 -0.9 5,098,220 - Psyr_4273 0.69 -1.2 5,098,220 - Psyr_4273 0.69 -3.1 5,098,220 - Psyr_4273 0.69 -1.3 5,098,220 - Psyr_4273 0.69 +0.5 5,098,220 - Psyr_4273 0.69 +0.4 5,098,220 - Psyr_4273 0.69 +0.2 5,098,220 - Psyr_4273 0.69 +0.3 5,098,373 + Psyr_4273 0.77 -0.2 5,098,508 - Psyr_4273 0.83 +1.1 5,098,606 + Psyr_4273 0.88 -1.6 5,098,606 + Psyr_4273 0.88 -0.1 5,098,606 + Psyr_4273 0.88 -2.1 5,098,606 + Psyr_4273 0.88 +0.9 5,098,606 + Psyr_4273 0.88 +0.2 5,098,607 - Psyr_4273 0.88 +0.6 5,098,607 - Psyr_4273 0.88 -0.2 5,098,607 - Psyr_4273 0.88 +1.1 5,098,607 - Psyr_4273 0.88 -0.8 5,098,607 - Psyr_4273 0.88 +3.4 5,098,607 - Psyr_4273 0.88 -0.3 5,098,607 - Psyr_4273 0.88 -1.0 5,098,607 - Psyr_4273 0.88 -0.5 5,098,690 + +0.4 5,098,690 + +0.1 5,098,690 + -1.1 5,098,690 + -0.5 5,098,690 + +0.2 5,098,690 + +1.1 5,098,690 + +2.0 5,098,691 - +0.9 5,098,691 - +0.1 5,098,691 - +1.8 5,098,691 - +0.4 5,098,691 - -1.2 5,098,711 + -0.5 5,098,711 + -0.0 5,098,711 + -1.2 5,098,711 + +0.1 5,098,711 + -0.0 5,098,711 + -0.1 5,098,711 + -1.0 5,098,711 + -0.8 5,098,712 - +1.1 5,098,712 - +0.5 5,098,712 - -0.3 5,098,712 - +0.5 5,098,712 - -0.1 5,098,712 - +2.1 5,098,712 - -1.0 5,098,712 - +1.1 5,098,712 - -0.8 5,098,712 - +0.3 5,098,712 - -1.1 5,098,715 + -0.5 5,098,715 + -1.5 5,098,715 + -0.1 5,098,715 + -0.5 5,098,715 + +0.5 5,098,715 + -1.8 5,098,715 + +1.0 5,098,715 + -0.7 5,098,715 + -0.5 5,098,715 + -1.9 5,098,715 + -1.0 5,098,716 - +0.5 5,098,716 - -1.2 5,098,716 - -2.5 5,098,716 - -0.9 5,098,716 - +0.7 5,098,716 - +0.1 5,098,716 - +0.5 5,098,716 - -1.0 5,098,716 - -1.2 5,098,716 - -1.6 5,098,716 - -1.0 5,098,716 - +1.1 5,098,716 - -1.2 5,098,716 - -2.0 5,098,716 - -0.5 5,098,716 - +1.5 5,098,719 + -2.1 5,098,720 - -0.3 5,098,839 - +0.8 5,098,839 - -1.0 5,098,841 + +0.7 5,098,841 + +0.5 5,098,844 + -0.3 5,098,844 + -1.8 5,098,877 + +1.1 5,098,877 + +0.7 5,098,877 + +0.1 5,098,877 + -0.5 5,098,877 + -1.8 5,098,878 - +0.7 5,098,938 + +0.8 5,098,938 + +0.4 5,098,938 + +0.8 5,098,939 - +0.4 5,098,976 + +1.4 5,099,042 + -0.9 5,099,042 + -0.6 5,099,058 + -0.4 5,099,059 - -0.2 5,099,088 + -1.3 5,099,339 + Psyr_4274 0.54 -0.4 5,099,339 + Psyr_4274 0.54 +2.1 5,099,339 + Psyr_4274 0.54 +0.3 5,099,339 + Psyr_4274 0.54 +0.8 5,099,339 + Psyr_4274 0.54 +1.1 5,099,339 + Psyr_4274 0.54 -0.6 5,099,339 + Psyr_4274 0.54 -0.3 5,099,339 + Psyr_4274 0.54 -2.7 5,099,339 + Psyr_4274 0.54 -1.4 5,099,339 + Psyr_4274 0.54 -0.2 5,099,339 + Psyr_4274 0.54 +0.3 5,099,339 + Psyr_4274 0.54 +0.2 5,099,339 + Psyr_4274 0.54 +0.9 5,099,339 + Psyr_4274 0.54 +0.6 5,099,339 + Psyr_4274 0.54 -0.2 5,099,339 + Psyr_4274 0.54 +1.5 5,099,340 - Psyr_4274 0.55 -0.3 5,099,340 - Psyr_4274 0.55 +1.2 5,099,340 - Psyr_4274 0.55 +1.1 5,099,340 - Psyr_4274 0.55 +0.1 5,099,340 - Psyr_4274 0.55 -0.2 5,099,340 - Psyr_4274 0.55 -1.2 5,099,340 - Psyr_4274 0.55 -0.3 5,099,340 - Psyr_4274 0.55 +0.7 5,099,340 - Psyr_4274 0.55 -1.9 5,099,340 - Psyr_4274 0.55 +0.1 5,099,340 - Psyr_4274 0.55 +0.9 5,099,340 - Psyr_4274 0.55 +0.3 5,099,514 + -1.3 5,099,514 + -0.1 5,099,907 - Psyr_4275 0.29 -0.7 5,100,009 - Psyr_4275 0.36 +2.6 5,100,168 + Psyr_4275 0.48 +1.4 5,100,168 + Psyr_4275 0.48 -0.5 5,100,168 + Psyr_4275 0.48 -1.5 5,100,168 + Psyr_4275 0.48 -0.0 5,100,169 - Psyr_4275 0.48 +0.1 5,100,169 - Psyr_4275 0.48 +2.0
Or see this region's nucleotide sequence